SynExtend
Tools for Working With Synteny Objects

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SynExtend: Tools for Working With Synteny Objects
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Man pages for SynExtend
Tools for Working With Synteny Objects

ExactSelectModel for identifying erroneously linked pairs
gffToDataFrameGenerate a DataFrame of gene calls from a gff3 file
GlobalSelectModel for identifying erroneously linked pairs
LinkedPairs-classTables of where syntenic hits link pairs of genes
LocalSelectModel for identifying erroneously linked pairs
NucleotideOverlapTabulating Pairs of Genomic Sequences
PairSummariesSummarize connected pairs in a LinkedPairs object
SynExtend documentation built on Nov. 8, 2020, 7:50 p.m.

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