Files in bgafun
BGAfun A method to identify specifity determining residues in protein families
NAMESPACE
DESCRIPTION
build/vignette.rds
data/LDH.rda
data/LDH.aap.rda
data/LDH.amino.rda
data/LDH.groups.rda
data/LDH.amino.gapless.rda
data/LDH.aap.ave.rda
data/LDH.amino.pseudo.rda
R/create_colnames_AAP.R
R/convert_seq_amino.R
R/sum_aln.R
R/calculate_pseudo.R
R/create_colnames_amino.R
R/amino_counts.R
R/Calculate_Row_Weights.R
R/create_profile_strings.R
R/convert_seq_AAP.R
R/add_pseudo_counts.R
R/remove_gaps.R
R/create_probab.R
R/sum_20_cols.R
R/pseudo_counts.R
R/convert_aln_amino.R
R/create_profile.R
R/Weight_Amino.R
R/sum_20_aln.R
R/top_residues_2_groups.R
R/average_cols_aap.R
R/Henikoff_weights.R
R/run_between_pca.R
R/remove_gaps_groups.R
R/convert_aln_AAP.R
vignettes/mystyle.bst
vignettes/bgafun.rnw
vignettes/Bibtext.bib
man/create_probab.Rd
man/sum_aln.Rd
man/sum_20_aln.Rd
man/amino_counts.Rd
man/create_colnames_amino.Rd
man/convert_seq_amino.Rd
man/LDH.amino.Rd
man/LDH.Rd
man/calculate_pseudo.Rd
man/convert_aln_AAP.Rd
man/create_profile.Rd
man/create_colnames_AAP.Rd
man/remove_gaps.Rd
man/Weight_Amino.Rd
man/add_pseudo_counts.Rd
man/create_profile_strings.Rd
man/LDH.aap.ave.Rd
man/run_between_pca.Rd
man/convert_amino.package.Rd
man/convert_seq_AAP.Rd
man/LDH.amino.gapless.Rd
man/convertAAP.package.Rd
man/Henikoff_weights.Rd
man/pseudo_counts.Rd
man/top_residues_2_groups.Rd
man/LDH.amino.pseudo.Rd
man/remove_gaps_groups.Rd
man/LDH.aap.Rd
man/convert_aln_amino.Rd
man/Calculate_Row_Weights.Rd
man/LDH.groups.Rd
man/average_cols_aap.Rd
man/sum_20_cols.Rd
man/bgafun.Rd
inst/doc/bgafun.R
inst/doc/bgafun.pdf
inst/doc/bgafun.rnw
inst/sequences/LDH-MDH-PF00056.fasta
