Man pages for cfDNAPro
This Package Helps Characterise and Visualise Whole Genome Sequencing Data from Liquid Biopsy
| callMetrics | Calculate the metrics of insert size |
| callMode | Calculate the mode fragment size of each sample |
| callPeakDistance | Calculate the inter-peak distance of insert size |
| callSize | Calculate the insert size metrics (i.e. prop, cdf, 1-cdf) or... |
| callValleyDistance | Calculate the inter-valley distance of insert size |
| examplePath | Get path to cfDNAPro example folder. |
| plotAllToOne | Plot the raw fragment size metrics (e.g. proportion, cdf and... |
| plotMetrics | Plot the fragment size metrics (i.e. proportion, cdf and... |
| plotMode | Plot mode fragment size |
| plotModesummary | Summarize and plot mode fragment size in a stacked bar chart |
| plotPeakDistance | Plot the inter-peak distance of fragment size distance... |
| plotSinglegroup | Plot the raw fragment size metrics of single group in a... |
| plotValleyDistance | Plot the inter-valley distance of fragment size distance... |
