mzR
parser for netCDF, mzXML, mzData and mzML and mzIdentML files (mass spectrometry data)

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Functions
177
Source code
30
Man pages
8
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mzR: parser for netCDF, mzXML, mzData and mzML and mzIdentML files (mass spectrometry data)
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API

API for mzR
parser for netCDF, mzXML, mzData and mzML and mzIdentML files (mass spectrometry data)

Global functions
.check_software_processing Source code
.empty_chromatogram Source code
.empty_chromatogram_header Source code
.hasChromatograms Source code
.hasSpectra Source code
.isolationWindow Source code
.multipleIsolationWindows Source code
.mzRBackend Source code
.mzRBackendFromContent Source code
.onLoad Source code
.peaks Source code
.peaks_ramp Source code
.validSpectrumList Source code
.validateHeader Source code
analyzer Man page
analyzer,mzRnetCDF-method Man page
analyzer,mzRpwiz-method Man page
analyzer,mzRramp-method Man page
chromatogram Man page
chromatogram,mzRnetCDF-method Man page
chromatogram,mzRpwiz-method Man page
chromatogram,mzRramp-method Man page
chromatogramHeader Man page
chromatogramHeader,mzRnetCDF-method Man page
chromatogramHeader,mzRpwiz-method Man page
chromatogramHeader,mzRramp-method Man page
chromatograms Man page
chromatograms,mzRnetCDF-method Man page
chromatograms,mzRpwiz-method Man page
chromatograms,mzRramp-method Man page
chromatogramsInfo Man page
chromatogramsInfo,mzRpwiz-method Man page
class:mzR Man page
class:mzRident Man page
class:mzRnetCDF Man page
class:mzRpwiz Man page
class:mzRramp Man page
close Man page
close,mzRnetCDF-method Man page
close,mzRpwiz-method Man page
close,mzRramp-method Man page
copyWriteMSData Man page Source code
database Man page
database,mzRident-method Man page
detector Man page
detector,mzRnetCDF-method Man page
detector,mzRpwiz-method Man page
detector,mzRramp-method Man page
enzymes Man page
enzymes,mzRident-method Man page
fileName Man page
fileName,mzR-method Man page
get3Dmap Man page
get3Dmap,mzRpwiz-method Man page
get3Dmap,mzRramp-method Man page
header Man page
header,mzRnetCDF,missing-method Man page
header,mzRnetCDF,numeric-method Man page
header,mzRpwiz,missing-method Man page
header,mzRpwiz,numeric-method Man page
header,mzRramp,missing-method Man page
header,mzRramp,numeric-method Man page
headerFor Source code
initializeRamp Man page
initializeRamp,mzRramp-method Man page
instrumentInfo Man page
instrumentInfo,mzRnetCDF-method Man page
instrumentInfo,mzRpwiz-method Man page
instrumentInfo,mzRramp-method Man page
ionisation Man page
ionisation,mzRnetCDF-method Man page
ionisation,mzRpwiz-method Man page
ionisation,mzRramp-method Man page
isInitialized Man page
isInitialized,mzRnetCDF-method Man page
isInitialized,mzRramp-method Man page
isolationWindow Man page
isolationWindow,character-method Man page
isolationWindow,mzRpwiz-method Man page
isolationWindow,mzRramp-method Man page
isolationWindow-methods Man page
length Man page
length,mzRident-method Man page
length,mzRnetCDF-method Man page
length,mzRpwiz-method Man page
length,mzRramp-method Man page
manufacturer Man page
manufacturer,mzRnetCDF-method Man page
manufacturer,mzRpwiz-method Man page
manufacturer,mzRramp-method Man page
model Man page
model,mzRnetCDF-method Man page
model,mzRpwiz-method Man page
model,mzRramp-method Man page
modifications Man page
modifications,mzRident-method Man page
mzR-class Man page
mzRident-class Man page
mzRnetCDF-class Man page
mzRpwiz-class Man page
mzRramp-class Man page
mzidInfo Man page
mzidInfo,mzRident-method Man page
nChrom Man page Source code
netCDFAttText Source code
netCDFClose Source code
netCDFInstrumentInfo Source code
netCDFIsFile Source code
netCDFMSPoints Source code
netCDFOpen Source code
netCDFRawData Source code
netCDFRunInfo Source code
netCDFVarDouble Source code
netCDFVarID Source code
netCDFVarInt Source code
netCDFVarLen Source code
netCDFVarText Source code
openIDfile Man page Source code
openMSfile Man page Source code
para Man page
para,mzRident-method Man page
peaks Man page
peaks,mzRnetCDF-method Man page
peaks,mzRpwiz-method Man page
peaks,mzRramp-method Man page
peaksCount Man page
peaksCount,mzRpwiz,missing-method Man page
peaksCount,mzRpwiz,numeric-method Man page
peaksCount,mzRramp,missing-method Man page
peaksCount,mzRramp,numeric-method Man page
psms Man page
psms,mzRident-method Man page
pwiz.version Man page Source code
rampClose Source code
rampCloseAll Source code
rampInit Source code
rampIsFile Source code
rampNumScans Source code
rampOpen Source code
rampPrintFiles Source code
rampRawData Source code
rampRawDataMSn Source code
rampSIPeaks Source code
rampScanHeaders Source code
runInfo Man page
runInfo,mzRnetCDF-method Man page
runInfo,mzRpwiz-method Man page
runInfo,mzRramp-method Man page
sampleInfo Man page
sampleInfo,mzRpwiz-method Man page
score Man page
score,mzRident-method Man page
softwareInfo Man page
softwareInfo,mzRident-method Man page
softwareInfo,mzRpwiz-method Man page
sourceInfo Man page
sourceInfo,mzRident-method Man page
sourceInfo,mzRpwiz-method Man page
specParams Man page
specParams,mzRident-method Man page
spectra Man page
spectra,mzRnetCDF-method Man page
spectra,mzRpwiz-method Man page
spectra,mzRramp-method Man page
substitutions Man page
substitutions,mzRident-method Man page
tic Man page
tic,mzRpwiz-method Man page
tolerance Man page
tolerance,mzRident-method Man page
writeMSData Man page
writeMSData,list,character-method Man page
mzR documentation built on Nov. 20, 2020, 2 a.m.

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