Biocview "limma"

RCPA

Consensus Pathway Analysis

LeonSong1995/mthodtest

Estimate Cell-type Proportions of Bulk RNA-Seq Data with Linear Mixed Model

SAFE-ICU/GeneExpressionNetworkToolkit

Gene Expression Network Toolkit

lagelab/Genoppi

genoppi

frhl/genoppi-v4

genoppi

espors/idepGolem

Integrated Differential Expression and Pathway Analysis

montilab/iEDGE

integrative analysis of (epi-)DNA and gene expression data

jakubmie/MACC

MNase accesibility (MACC) scores.

cgplab/RadAR

Radiomic Analysis with R

ShinyFabio/ADViSELipidomics

Shinyapp for the acquisition and the analysis of lipidomics data

amitfrish/scBio

Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data

scBio

Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data

BlishLab/scriabin

Single-cell resolved interaction analysis through binning

stela2502/StefansExpressionSet

StefansExpressionSet

stela2502/BioData

The package allows to annotate a numeric data.table with col and row data

ssarda/genomeutils

Utilities for Genome Analysis