We extend existing gene enrichment tests to perform adverse event enrichment analysis. Unlike the continuous gene expression data, adverse event data are counts. Therefore, adverse event data has many zeros and ties. We propose two enrichment tests. One is a modified Fisher's exact test based on pre-selected significant adverse events, while the other is based on a modified Kolmogorov-Smirnov statistic. We add Covariate adjustment to improve the analysis."Adverse event enrichment tests using VAERS" Shuoran Li, Lili Zhao (2020) <arXiv:2007.02266>.
Package details |
|
---|---|
Author | Shuoran Li [aut], Hongfan Chen [aut], Lili Zhao [aut], Michael Kleinsasser [aut, cre] |
Maintainer | Michael Kleinsasser <mkleinsa@umich.edu> |
License | GPL-2 |
Version | 1.1.0 |
URL | https://github.com/umich-biostatistics/AEenrich |
Package repository | View on CRAN |
Installation |
Install the latest version of this package by entering the following in R:
|
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.