API for AMISforInfectiousDiseases
Implement the AMIS Algorithm for Infectious Disease Models
| Global functions | |
|---|---|
| AMISforInfectiousDiseases | Man page |
| AMISforInfectiousDiseases-package | Man page |
| amis | Man page Source code |
| calc_log_norm_const_gaussian | Source code |
| calculate_ess | Source code |
| calculate_summaries | Man page Source code |
| check_inputs | Source code |
| check_zero_weight_for_all_particles | Source code |
| compute_likelihood | Source code |
| compute_model_evidence | Source code |
| compute_prior_proposal_ratio | Source code |
| compute_weight_matrix | Source code |
| compute_weight_matrix_empirical_gauss | Source code |
| compute_weight_matrix_empirical_histogram | Source code |
| compute_weight_matrix_empirical_uniform | Source code |
| compute_weight_matrix_without_g | Source code |
| default_amis_params | Man page Source code |
| evaluate_likelihood | Source code |
| f_estimator_Gaussian | Source code |
| f_estimator_histogram | Source code |
| f_estimator_uniform | Source code |
| f_user_defined | Source code |
| fit_mixture | Source code |
| get_locations_first_t | Source code |
| get_locs_with_g | Source code |
| get_locs_without_g | Source code |
| get_which_valid_locs_prev_map | Source code |
| get_which_valid_prev_map | Source code |
| plot.amis | Man page Source code |
| plot_mixture_components | Man page Source code |
| print.amis | Man page Source code |
| sample_new_parameters | Source code |
| sample_parameters | Man page Source code |
| summary.amis | Man page Source code |
| systematic_sample | Source code |
| update_Mclust_object | Source code |
| update_according_to_ess_value | Source code |
| update_mixture_components | Source code |
| weighted_mixture | Source code |
