Apoderoides: Prioritize and Delete Erroneous Taxa in a Large Phylogenetic Tree

Finds, prioritizes and deletes erroneous taxa in a phylogenetic tree. This package calculates scores for taxa in a tree. Higher score means the taxon is more erroneous. If the score is zero for a taxon, the taxon is not erroneous. This package also can remove all erroneous taxa automatically by iterating score calculation and pruning taxa with the highest score.

Package details

AuthorSatoshi Aoki [aut, cph, cre], Keita Fukasawa [ctb]
MaintainerSatoshi Aoki <aokis1ll1@gmail.com>
LicenseMIT + file LICENSE
Version3.0.1
URL https://github.com/Sa-to-shi-A-o-ki/Apoderoides
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("Apoderoides")

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Apoderoides documentation built on June 8, 2025, 10:31 a.m.