Man pages for BisRNA
Analysis of RNA Cytosine-5 Methylation
| Bisdata | Three synthetic samples of RNA bisulfite sequencing for... |
| Bisdata1 | Synthetic sample 1 of RNA bisulfite sequencing |
| Bisdata2 | Synthetic sample 2 of RNA bisulfite sequencing |
| Bisdata3 | Synthetic sample 3 of RNA bisulfite sequencing |
| BisRNA-package | Analysis of RNA Cytosine-5 Methylation from bisulfite... |
| class.BisXP | Cast bisulfite experiment data into a BisXP object |
| fisher.method | Function implementing Fisher's method to combine independent... |
| intersectMatrix | Take intersection of 2 tables |
| read.BisXP | Read RNA bisulfite experiment data and cast it into a BisXP... |
| RNAmeth.poisson.par | Find ratio (Poisson parameter / coverage) for one sample of... |
| RNAmeth.poisson.test | Test RNA Cytosine methylation based on Poisson model... |
| samples.combine | Combine samples p-values and ratios |
| testMeth | Apply poisson.test to BS coverage and non-conversion ratio. |
