Files in CancerEvolutionVisualization

Publication Quality Phylogenetic Tree Plots

R/create.ccf.heatmap.R R/create.cluster.heatmap.R R/position.nodes.radial.R R/main.R R/prep.branch.lengths.R R/get.colours.R R/set.up.plot.area.R R/calculate.clone.polygons.R R/prep.text.R R/position.clones.R R/add.nodes.R R/create.ccf.summary.heatmap.R R/SRCGrob.R R/tree.tiers.R R/axis.ticks.R R/angles.R R/add.text.R R/utility.R R/branch.length.scaling.R R/add.segs.R R/prep.tree.R R/get.CP.polygons.R R/adjust.tree.R R/make.clone.tree.grobs.R inst/doc/UserGuide.Rmd inst/doc/UserGuide.R tests/testthat.R tests/testthat/helper-multitest.R tests/testthat/helper-compare.R tests/testthat/test-linear.R tests/testthat/test-options.R tests/testthat/test-prep.tree.R tests/testthat/test-branching.R tests/testthat/test-prep.branch.lengths.R tests/testthat/test-utility.R tests/testthat/test-prep.text.R tests/testthat/test-branch.length.scaling.R tests/testthat/test-angles.R tests/testthat/test-axis.ticks.R vignettes/UserGuide.Rmd man/colours.Rd man/SRCGrob.Rd