API for Certara.NLME8
Utilities for Certara's Nonlinear Mixed-Effects Modeling Engine
| Global functions | |
|---|---|
| .StdErrorComputation | Source code |
| .add_SortScenario | Source code |
| .check_numSortColumns | Source code |
| .convertStrBinToStrHex | Source code |
| .create_posthocStacked | Source code |
| .get_IDcols | Source code |
| .get_InputDataFileNames | Source code |
| .get_Sorts | Source code |
| .get_SortsScenarioDF | Source code |
| .get_VIFobs | Source code |
| .get_bluptable | Source code |
| .get_cols1Text | Source code |
| .get_dmptxt | Source code |
| .get_outputDF | Source code |
| .get_outtxt | Source code |
| .get_scenarioName | Source code |
| .isnew_SummaryLine | Source code |
| .output_StartedJobName | Source code |
| .output_line | Source code |
| .output_progress | Source code |
| .parse_OutFileStructure | Source code |
| .parse_outputFile | Source code |
| .remove_dmptxtParts | Source code |
| .rename_IDs | Source code |
| CancelProgress | Source code |
| CheckUserCommands | Source code |
| CompleteProgress | Source code |
| FailProgress | Source code |
| InterimResultsRequested | Source code |
| IsEarlyTerminationRequested | Source code |
| IsJobCanceled | Source code |
| OLDrunNLMEInitialRun | Source code |
| RemoveUserCommands | Source code |
| ReportProgress | Source code |
| ResetMPIFlags | Source code |
| UpdateMDLfrom_dmptxt | Man page Source code |
| UpdateProgress | Source code |
| UpdateProgressMessages | Source code |
| WriteResultsStatusFile | Source code |
| cat_filesWarnLong | Source code |
| checkGCC | Man page Source code |
| checkInstallDir | Man page Source code |
| checkJobStatus | Source code |
| checkLicenseFile | Man page Source code |
| checkLinuxGCC | Source code |
| checkMPILinux | Source code |
| checkMPISettings | Man page Source code |
| checkMPIWindows | Source code |
| checkRootDir | Man page Source code |
| checkWindowsGCC | Source code |
| check_Arguments | Source code |
| cleanupFromPreviousRun | Source code |
| collateTables | Source code |
| collectJobErrorLogs | Source code |
| collectJobErrors | Source code |
| collectJobResults | Source code |
| collectJobResultsGeneric | Source code |
| collectJobStatusAndCoreFiles | Source code |
| compileAndLinkNLME | Source code |
| concatenateInitEstimates | Source code |
| copyResults | Source code |
| copy_InputFiles | Source code |
| copy_filesWarnLong | Source code |
| createJobsDirectory | Source code |
| create_jobdirs | Source code |
| figureOutDmpFileLocation | Source code |
| figureOutMpiNumCores | Source code |
| figureOutMpiNumCoresForPop | Source code |
| generateBootstrapResults | Source code |
| generateConvergenceFile | Source code |
| generateDoseTable | Source code |
| generateEtaEtaTable | Source code |
| generateEtaSpreadsheet | Source code |
| generateFrozenModelFile | Source code |
| generateGenericTable | Source code |
| generateInitialScenarios | Source code |
| generateJobResults | Source code |
| generateNLMEScriptAndRun | Source code |
| generateNonparamSummary | Source code |
| generateOmegaEtas | Source code |
| generateOverallSummary | Source code |
| generateProfileModels | Source code |
| generateProfileSummary | Source code |
| generateResiduals | Source code |
| generateSecondary | Source code |
| generateSelCovarSearchArgsLine | Source code |
| generateStatusWindow | Source code |
| generateThetaCovCorFiles | Source code |
| generateVIFParDerTables | Source code |
| getBatchDirectoryLocation | Source code |
| getBestResults | Source code |
| getCovariateNames | Source code |
| getExePostfix | Source code |
| getExtraArgumentFilename | Source code |
| getExtraArgumentFilenameIndex | Source code |
| getGenericResultsList | Source code |
| getListOfExesNeeded | Source code |
| getLocalTimeUTC | Source code |
| getMinimumNumSubjects | Source code |
| getNlmePopulationFactor | Source code |
| getNumSubjects | Source code |
| getOutputFilenames | Source code |
| getRunSuccessFilename | Source code |
| getScenarioKey | Source code |
| getScenarioName | Source code |
| getTableNames | Man page Source code |
| get_ReturnedFilesPattern | Source code |
| grabDoneReplicates | Source code |
| hangAroundABitForTheStatusFile | Source code |
| killAGridJob | Source code |
| listJobErrors | Source code |
| moveStepwiseOutputFiles | Source code |
| mpiAutoNumCores | Source code |
| multiCoreGeneric | Source code |
| nlmeEnvIsDone | Source code |
| performBootstrap | Man page Source code |
| performEstimationOnSortColumns | Man page Source code |
| performParallelNLMERun | Man page Source code |
| performProfileEstimation | Man page Source code |
| performShotgunCovarSearch | Man page Source code |
| performStepwiseCovarSearch | Man page Source code |
| prepare_ClusterRegistry | Source code |
| readEtaCovTxtFile | Source code |
| readNlmeArgsFile | Source code |
| readProgressDotTxt | Source code |
| readProgressUpdate | Source code |
| readStrCovTxtFile | Source code |
| reconnectGenericGridJob | Source code |
| reconnectToBootstrapNLMERun | Man page Source code |
| reconnectToGenericNLMERun | Source code |
| reformatResidualsFile | Source code |
| removeTempWorkingDirectory | Source code |
| reportCurrentStatus | Source code |
| report_filesToGenerate | Source code |
| requestStopEarly | Source code |
| runNLMEBootstrapSample | Source code |
| runNLMEGenericSample | Source code |
| runNLMEInitialRun | Source code |
| runNLMEInitialSample | Source code |
| runNLMESample | Source code |
| shortModelName | Source code |
| shrinkDmpDotTxt | Source code |
| sortByColumnAndGenerateControlFile | Source code |
| startAndMonitorMulticoreJobs | Source code |
| startGenericGridJob | Source code |
| summarizeBootstrap | Source code |
| summarizeCovarSearch | Source code |
| summarizeProfileEstimation | Source code |
| summarizeSimpleEstimation | Source code |
| summarizeStepwiseCovarSearch | Source code |
| updateCompileStatus | Source code |
| updateInitialStatus | Source code |
| waitTillAllJobsAreFinished | Source code |
| writeOutGlobals | Source code |
| write_function_to_file | Source code |
