Files in Certara.NLME8
Utilities for Certara's Nonlinear Mixed-Effects Modeling Engine
MD5
README.md
NAMESPACE
DESCRIPTION
R/generateGenericTable.R
R/writeOutGlobals.R
R/generateResiduals.R
R/generateOverallSummary.R
R/generateSelCovarSearchArgsLine.R
R/reconnectToGenericNLMERun.R
R/summarizeCovarSearch.R
R/generateOmegaEtas.R
R/cat_filesWarnLong.R
R/collectJobErrors.R
R/readProgressUpdate.R
R/parse_outputFile.R
R/performParallelNLMERun.R
R/performStepwiseCovarSearch.R
R/generateJobResults.R
R/UpdateMDLfrom_dmptxt.R
R/UpdateProgress.R
R/reconnectToBootstrapNLMERun.R
R/checkHostParams.R
R/performEstimationOnSortColumns.R
R/startAndMonitorMulticoreJobs.R
R/write_function_to_file.R
R/runNLMESample.R
R/copy_filesWarnLong.R
R/generateInitialScenarios.R
R/multiCoreGeneric.R
R/generateNonparamSummary.R
R/summarizeBootstrap.R
R/summarizeProfileEstimation.R
R/FailProgress.R
R/updateInitialStatus.R
R/getBestResults.R
R/collectJobResults.R
R/performBootstrap.R
R/generateSecondary.R
R/CancelProgress.R
R/OLDrunNLMEInitialRun.R
R/create_jobdirs.R
R/parallel_utl.r
R/readStrCovTxtFile.R
R/runNLMEGenericSample.R
R/generateStatusWindow.R
R/performShotgunCovarSearch.R
R/readEtaCovTxtFile.R
R/summarizeSimpleEstimation.R
R/collectJobResultsGeneric.R
R/concatenateInitEstimates.R
R/generateNLMEScriptAndRun.R
R/collateTables.R
R/get_bluptable.R
R/copy_InputFiles.R
R/reconnectGenericGridJob.R
R/startGenericGridJob.R
R/summarizeStepwiseCovarSearch.R
R/generateEtaSpreadsheet.R
R/performProfileEstimation.R
R/runNLMEInitialRun.R
R/sortByColumnAndGenerateControlFile.R
R/globals.R
R/ReportProgress.R
R/readProgressDotTxt.R
R/moveStepwiseOutputFiles.R
R/generateConvergenceFile.R
R/get_VIFs.R
R/UpdateProgressMessages.R
R/generateThetaCovCorFiles.R
inst/extdata/simIntegrationErrors/test.mdl
inst/extdata/simIntegrationErrors/jobArgsCombined.txt
inst/extdata/simIntegrationErrors/jobControlFile.txt
inst/extdata/simIntegrationErrors/data1.txt
inst/extdata/simIntegrationErrors/cols1.txt
inst/extdata/performShotgunCovarSearch/newNlmeargsCombined.txt
inst/extdata/performShotgunCovarSearch/test.mdl
inst/extdata/performShotgunCovarSearch/jobArgsCombined.txt
inst/extdata/performShotgunCovarSearch/newNlmeControlFile.txt
inst/extdata/performShotgunCovarSearch/data1.txt
inst/extdata/performShotgunCovarSearch/Overall.expected
inst/extdata/performShotgunCovarSearch/cols1.txt
inst/extdata/performBootstrap/test.mdl
inst/extdata/performBootstrap/out.expected
inst/extdata/performBootstrap/jobArgsCombined.txt
inst/extdata/performBootstrap/jobControlFile.txt
inst/extdata/performBootstrap/data1.txt
inst/extdata/performBootstrap/cols1.txt
inst/extdata/performEstimationOnSortColumns/test.mdl
inst/extdata/performEstimationOnSortColumns/jobArgsCombined.txt
inst/extdata/performEstimationOnSortColumns/jobControlFile.txt
inst/extdata/performEstimationOnSortColumns/data1.txt
inst/extdata/performEstimationOnSortColumns/Overall.expected
inst/extdata/performEstimationOnSortColumns/cols1.txt
inst/extdata/performVPC/test.mdl
inst/extdata/performVPC/jobArgsCombined.txt
inst/extdata/performVPC/predout.expected
inst/extdata/performVPC/jobControlFile.txt
inst/extdata/performVPC/data1.txt
inst/extdata/performVPC/cols1.txt
inst/extdata/performProfileEstimation/Profile.windows
inst/extdata/performProfileEstimation/test.mdl
inst/extdata/performProfileEstimation/jobArgsCombined.txt
inst/extdata/performProfileEstimation/Profile.expected
inst/extdata/performProfileEstimation/jobControlFile.txt
inst/extdata/performProfileEstimation/data1.txt
inst/extdata/performProfileEstimation/Profile.unix
inst/extdata/performProfileEstimation/cols1.txt
inst/extdata/performParallelNLMERun/test.mdl
inst/extdata/performParallelNLMERun/jobArgsCombined.txt
inst/extdata/performParallelNLMERun/jobControlFile.txt
inst/extdata/performParallelNLMERun/data1.txt
inst/extdata/performParallelNLMERun/Overall.expected
inst/extdata/performParallelNLMERun/cols1.txt
inst/extdata/performParallelNLMERun/multipleIds/StrCovariateCat.expected
inst/extdata/performParallelNLMERun/multipleIds/StrCovariate.expected
inst/extdata/performParallelNLMERun/multipleIds/test.mdl
inst/extdata/performParallelNLMERun/multipleIds/nonParEtaResult.expected
inst/extdata/performParallelNLMERun/multipleIds/jobArgsCombined.txt
inst/extdata/performParallelNLMERun/multipleIds/EtaCovariateCat.expected
inst/extdata/performParallelNLMERun/multipleIds/EtaCov.expected
inst/extdata/performParallelNLMERun/multipleIds/jobControlFile.txt
inst/extdata/performParallelNLMERun/multipleIds/data1.txt
inst/extdata/performParallelNLMERun/multipleIds/EtaCovariate.expected
inst/extdata/performParallelNLMERun/multipleIds/EtaEta.expected
inst/extdata/performParallelNLMERun/multipleIds/cols1.txt
inst/extdata/performStepwiseCovarSearch/test.mdl
inst/extdata/performStepwiseCovarSearch/jobArgsCombined.txt
inst/extdata/performStepwiseCovarSearch/jobControlFile.txt
inst/extdata/performStepwiseCovarSearch/data1.txt
inst/extdata/performStepwiseCovarSearch/Overall.expected
inst/extdata/performStepwiseCovarSearch/cols1.txt
tests/testthat.R
tests/testthat/test_profile.r
tests/testthat/test_bootstrap.r
tests/testthat/test_simpleFit.r
tests/testthat/test_VPC.r
tests/testthat/test_sortFit.r
tests/testthat/test_stepwise.r
tests/testthat/test_simpleFitMultIds.R
tests/testthat/test_shotgun.r
tests/testthat/test_simIntegrationErrors.r
man/performProfileEstimation.Rd
man/reconnectToBootstrapNLMERun.Rd
man/performShotgunCovarSearch.Rd
man/checkInstallDir.Rd
man/performBootstrap.Rd
man/checkRootDir.Rd
man/UpdateMDLfrom_dmptxt.Rd
man/performEstimationOnSortColumns.Rd
man/performParallelNLMERun.Rd
man/checkGCC.Rd
man/checkLicenseFile.Rd
man/performStepwiseCovarSearch.Rd
man/checkMPISettings.Rd
man/getTableNames.Rd
