Files in CommKern

Network-Based Communities and Kernel Machine Methods

NEWS.md README.md R/get_weights.R R/score_log_semiparm.R R/group_adj_perturb.R R/entropy.R R/compute_mod_matrix.R R/score_lin_semiparm.R R/datasets.R R/degree.R R/Adj_RI.R R/score_lin_nonparam.R R/simnet_df_perturb.R R/utilities.R R/subset_matrix_to_df.R R/kernel.R R/sort_pairs.R R/purity.R R/count_pairs.R R/score_log_nonparam.R R/group_network_perturb.R R/hier_mult_spin.R R/find_start_temp.R R/zrand.R R/community_plot.R R/consensus_similarity.R R/ext_distance.R R/ham_distance.R R/community_allegiance.R R/CommKern.R R/matrix_to_df.R R/compute_multimodal_mod.R R/up_low.R R/NMI.R R/matrix_plot.R R/heatbath_multimodal.R inst/doc/CommKern.Rmd inst/doc/CommKern.R inst/example_scripts/beta_simulation_dataset.R tests/test-score_log_nonparam.R tests/test-subset_matrix_to_df.R tests/test-degree.R tests/test-count_pairs.R tests/test-compute_multimodal_mod.R tests/test-ham_distance.R tests/test-up_low.R tests/test-trace.R tests/test-consensus_similarity.R tests/test-NMI.R tests/test-community_allegiance.R tests/test-matrix_to_df.R tests/test-ext_distance.R tests/test-sort_pairs.R tests/test-adj_RI.R tests/test-score_cont_semiparam.R tests/test-zrand.R tests/test-score_log_semiparam.R tests/test-hms.R tests/test-purity.R tests/test-entropy.R tests/test-compute_mod_matrix.R tests/test-kernel.R tests/test-score_cont_nonparam.R vignettes/CommKern.Rmd man/up_low.Rd man/adj_RI.Rd man/zrand.Rd man/heatbath_multimodal.Rd man/simnet_df_perturb.Rd man/entropy.Rd man/score_cont_nonparam.Rd man/simasd_comm_df.Rd man/hms.Rd man/community_allegiance.Rd man/score_log_nonparam.Rd man/tr.Rd man/subset_matrix_to_df.Rd man/matrix_plot.Rd man/community_plot.Rd man/consensus_similarity.Rd man/find_start_temp.Rd man/simasd_hamil_df.Rd man/get_weights.Rd man/score_cont_semiparam.Rd man/purity.Rd man/SBM_net.Rd man/degree.Rd man/ham_distance.Rd man/CommKern.Rd man/NMI.Rd man/group_adj_perturb.Rd man/compute_multimodal_mod.Rd man/group_network_perturb.Rd man/sort_pairs.Rd man/simasd_array.Rd man/kernel.Rd man/simasd_covars.Rd man/compute_modularity_matrix.Rd man/ext_distance.Rd man/matrix_to_df.Rd man/count_pairs.Rd man/score_log_semiparam.Rd