Man pages for ConnMatTools
Tools for Working with Connectivity Data
| betasVectorDefault | Compute vector of beta values |
| BevertonHolt | Beverton-Holt settler-recruit relationship |
| chile.loco | Connectivity matrix for loco (Concholepas concholepas) from... |
| ConnMatTools | Tools for working with connectivity matrices |
| damselfish.lods | Sample LOD score data for simulated and real parent-child... |
| DispersalPerRecruitModel | Population dynamics model based on lifetime-egg-production |
| d.mix.dists.func | Returns probability density function (PDF) for a mix of... |
| DPRHomerangeGravity | Extended DPR population dynamics model to include homerange... |
| d.rel.conn.beta.prior | Estimate the probability distribution of relative... |
| d.rel.conn.dists.func | Functions for estimating the probability distribution for... |
| d.rel.conn.finite.settlement | Estimate the probability distribution for the number of... |
| d.rel.conn.multinomial.unnorm | Calculates unnormalized probability density for relative... |
| d.rel.conn.multiple | Functions for estimating the probability distribution of... |
| d.rel.conn.unif.prior | Estimate the probability distribution of relative... |
| dual.mark.transmission | Fraction of eggs marked for male and female mark transmission |
| eigs | Compute some eigenvalues of a matrix |
| gammaParamsConvert | Gamma distribution shape and scale parameters from mean and... |
| hockeyStick | Hockey-stick settler-recruit relationship |
| laplacianConnMat | Uniform Laplacian connectivity matrix |
| localRetention | Local retention of a connectivity matrix |
| mergeSubpops | Merge subpopulations |
| optimalSplitConnMat | Iteratively, optimally split a connectivity matrix |
| optim.rel.conn.dists | Maximum-likelihood estimate for relative connectivity given... |
| prob.marked | Returns probability a set of observations correspond to... |
| protectedAreaSelection | Function to select optimal network of protected areas based... |
| qualitySubpops | Quality measure for subpopulation division |
| recSplitConnMat | Recursively subdivides a set of subpoplations |
| reducedConnMat | Reduced connectivity matrix according to a set of... |
| relativeLocalRetention | Relative local retention of a connectivity matrix |
| r.marked.egg.fraction | Estimates of fraction of eggs marked accounting for... |
| selfRecruitment | Self recruitment of a connectivity matrix |
| settlerRecruitSlopeCorrection | Correction for slope of settler-recruit relationship |
| splitConnMat | Split connectivity matrix into subpopulations |
| stepfun.hist | Create a probability density step function from a histogram... |
| subpopsVectorToList | Convert subpopulation vector to a list of indices |
