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CrossExpression: Cross-Expression Analysis of Spatial Transcriptomics Data
Analyzes spatial transcriptomic data using cells-by-genes and cell location matrices to find gene pairs that coordinate their expression between spatially adjacent cells. It enables quantitative analysis and graphical assessment of these cross-expression patterns. See Sarwar et al. (2025) <doi:10.1101/2024.09.17.613579> and <https://github.com/gillislab/CrossExpression/> for more details.
Getting started
Browse package contents
Package details |
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| Author | Ameer Sarwar [aut, cre], Sarah Choi [ctb], Leon French [ctb], Jesse Gillis [aut] |
| Maintainer | Ameer Sarwar <dogar.ameer@gmail.com> |
| License | MIT + file LICENSE |
| Version | 1.0.0 |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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