Man pages for DESA
Detecting Epidemics using School Absenteeism

alarm_metricsCreate an Alarm Metrics Object
alarm_plot_dataCreate Alarm Plot Data Object
best_modelCreate Best Model
catchment_simSimulating catchment areas
compile_epiCompile Epidemic Data
create_alarm_metrics_summaryCreate Alarm Metrics Summary
elementary_popCreate Elementary Schools population size
eval_metricsEvaluate Alarm Metrics for Epidemic Models
plot.alarm_metricsPlot Heatmap of Alarm Metrics
plot.alarm_plot_dataPlot Epidemic Data with Alarm Metrics
plot_single_epidemicPlot a single epidemic simulation
plot.ssir_epidemicPlot method for a single SSIR epidemic simulation
plot.ssir_epidemic_multiPlot method for multiple SSIR epidemic simulations
simulate_householdsSimulate total households and individuals data
ssirStochastic SIR simulation
subpop_childrenSimulate households with children
subpop_noChildrenSimulate households without children
summary.alarm_metrics_summarySummary of Alarm Metrics
summary.ssir_epidemicS3 Summary method for epidemic Simulation
summary.ssir_epidemic_multiS3 Summary method for multiple epidemic simulations
DESA documentation built on June 8, 2025, 10:19 a.m.