API for DEploid.utils
'DEploid' Data Analysis and Results Interpretation
| Global functions | |
|---|---|
| DEploid.utils | Man page |
| DEploid.utils-package | Man page |
| chooseSeed | Source code |
| computeEffectiveK | Source code |
| computeInferred.k | Source code |
| computeObsWSAF | Man page Source code |
| dEploidOutError_2 | Source code |
| dEploidOutError_3 | Source code |
| extractCoverageFromTxt | Man page Source code |
| extractCoverageFromVcf | Man page Source code |
| extractPLAF | Man page Source code |
| fun_dEploidPrefix | Source code |
| fun_dataExplore | Source code |
| fun_dic_by_llk_var | Source code |
| fun_dic_by_theta | Source code |
| fun_extract_coverage | Source code |
| fun_extract_exclude | Source code |
| fun_find_more | Source code |
| fun_getWSAF_corr | Source code |
| fun_getllk_dic | Source code |
| fun_interpretDEploid_1 | Source code |
| fun_interpretDEploid_2 | Source code |
| fun_interpretDEploid_3 | Source code |
| fun_interpretDEploid_3_ring | Source code |
| fun_interpretDEploid_4 | Source code |
| fun_interpretDEploid_best | Source code |
| fun_llk | Source code |
| fun_parse | Source code |
| fun_print_help | Source code |
| fun_print_help_explore | Source code |
| fun_print_help_interpret | Source code |
| fun_ring_plot_initialize | Source code |
| getProportionFromLastLine | Source code |
| haplotypePainter | Man page Source code |
| histWSAF | Man page Source code |
| plotAltVsRef | Man page Source code |
| plotObsExpWSAF | Man page Source code |
| plotProportions | Man page Source code |
| plotWSAFvsPLAF | Man page Source code |
| plot_ibd_change | Source code |
| plot_llk | Source code |
| plot_postProb_ofCase | Source code |
| plot_total_coverage | Source code |
| plot_wsaf_vs_index | Source code |
| plot_wsaf_vs_index_ring | Source code |
