Man pages for DRomics
Dose Response for Omics
| bmdboot | Computation of confidence interval on benchmark doses by... |
| bmdcalc | Computation of benchmark doses for responsive items |
| bmdfilter | Filtering BMDs according to estimation quality |
| bmdplot | BMD plot optionally with confidence intervals on BMD |
| bmdplotwithgradient | BMD plot with color gradient |
| continuousanchoringdata | Import and check of continuous anchoring apical data |
| curvesplot | Plot of fitted curves |
| drcfit | Dose response modelling for responsive items |
| ecdfplotwithCI | ECDF plot of a variable with given confidence intervals on... |
| ecdfquantileplot | ECDF plot of a given quantile of a variable calculated by... |
| formatdata4DRomics | Build an R object that can be used as data input in DRomics |
| itemselect | Selection of significantly responsive items |
| metabolomicdata | Import and check of continuous omic data (e.g. metabolomic... |
| microarraydata | Import, check and normalization of single-channel microarray... |
| PCAdataplot | Performs and plots the results of a PCA on omic data |
| RNAseqdata | Import, check and normalization and transformation of RNAseq... |
| Scenedesmus | Concentration-response effect of triclosan in Scenedesmus... |
| selectgroups | Selection of groups on which to focus |
| sensitivityplot | Plot of a summary of BMD values per group of items |
| targetplot | Dose-reponse plot for target items |
| trendplot | Plot of the repartition of trends per group |
| zebraf | Transcriptomic dose-response to ionizing radiation in... |
| Zhou | Dose-response kidney transcriptomic effect of... |
