Man pages for DSsim
Distance Sampling Simulations
| add.hotspot-methods | S4 generic method to add a hotspot to the density grid |
| check.sim.setup | check.sim.setup |
| covmod_summary | Covariate Truncation Simulation Summaries |
| cov_param | Parameter Estimates from Covariate Simulation |
| create.bins | Create bins from a set of binned distances and a set of... |
| create.region.table-methods | S4 generic method to generate a region table |
| create.sample.table-methods | S4 generic method to generate a sample table |
| create.survey.results-methods | S4 generic method to simulate a survey |
| data.for.distance | data.for.distance |
| DDF.Analysis-class | Class "DDF.Analysis" |
| DDF.Data-class | S4 Class "DDF.Data" |
| Density-class | Class "Density" |
| description.summary | Provides a description of the summary object/output Prints a... |
| Design.Summary-class | S4 Class "Design.Summary" |
| Detectability-class | S4 Class "Detectability" |
| generate.population-methods | S4 generic method to generate an instance of a population |
| generate.transects-methods | S4 generic method to generate an instance of a design |
| get.area-methods | Returns the area of the region |
| get.distance.data-methods | S4 generic method to extract distance data |
| get.N-methods | S4 generic method to return N |
| histogram.N.ests-methods | histogram.N.ests |
| Line.Transect-class | S4 Class "Line.Transect" |
| LT.Design-class | Virtual Class "LT.Design" extends Class "Survey.Design" |
| LT.Survey-class | Virtual Class "LT.Survey" extends class "Survey" |
| LT.Survey.Results-class | S4 Class "LT.Survey.Results" |
| make.ddf.analysis.list | Creates a list of DDF.Analysis objects |
| make.density | Creates a Density object |
| make.design | Creates a Survey.Design object |
| make.detectability | Creates a Detectablility object |
| make.population.description | Creates a Population.Description object |
| make.region | Creates a Region object |
| make.simulation | Creates a Simulation object |
| Obs.Table-class | Class "Obs.Table" |
| plot.DDF.Data-methods | Plot |
| plot.Density-methods | Plot |
| plot.Detectability-methods | Plot |
| plot.Line.Transect-methods | Plot |
| plot.LT.Survey.Results-methods | Plot |
| plot.Point.Transect-methods | Plot |
| plot.Population-methods | Plot |
| plot.Region-methods | Plot |
| plot.Survey.Results-methods | Plot |
| Point.Transect-class | S4 Class "Point.Transect" |
| Population-class | Class "Population" |
| Population.Description-class | Class "Population.Description" |
| Population.Summary-class | S4 Class "Population.Summary" |
| PT.Design-class | Virtual Class "PT.Design" extends Class "Survey.Design" |
| PT.Survey-class | Virtual Class "PT.Survey" extends class "Survey" |
| Region-class | Class "Region" |
| Region.Table-class | S4 Class "Region.Table" |
| rename.duplicates | Renumbers the object IDs for the duplicate observations... |
| rtpois | Randomly generates values from a zero-truncated Poisson... |
| run.analysis-methods | S4 generic method to run analyses |
| run-methods | S4 generic method to run a simulation |
| Sample.Table-class | Class "Sample.Table" |
| save.sim.results-methods | save.sim.results |
| show.Simulation-methods | show |
| show.Simulation.Summary-methods | show |
| Simulation-class | Class "Simulation" |
| Simulation.Summary-class | Class "Simulation.Summary" |
| Single.Obs.DDF.Data-class | S4 Class "Single.Obs.DDF.Data" |
| Single.Obs.LT.Survey-class | Class "Single.Obs.LT.Survey" |
| Single.Obs.PT.Survey-class | Class "Single.Obs.PT.Survey" |
| summary.Simulation-methods | summary |
| Survey-class | Virtual Class "Survey" |
| Survey.Design-class | S4 Class "Survey.Design" |
| Survey.Results-class | S4 Class "Survey.Results" |
| Transect-class | S4 Virtual Class "Transect" |
| transects | Shapefile describing the transects |
| trunc_cov_summary | Covariate Truncation Simulation Summaries |
| trunc_summary | Truncation Simulation Summaries |
