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DiPALM: Differential Pattern Analysis via Linear Modeling
Individual gene expression patterns are encoded into a series of eigenvector patterns ('WGCNA' package). Using the framework of linear model-based differential expression comparisons ('limma' package), time-course expression patterns for genes in different conditions are compared and analyzed for significant pattern changes. For reference, see: Greenham K, Sartor RC, Zorich S, Lou P, Mockler TC and McClung CR. eLife. 2020 Sep 30;9(4). <doi:10.7554/eLife.58993>.
Getting started
Browse package contents
Package details |
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| Author | Ryan C. Sartor <sartorry@gmail.com>, Kathleen Greenham <greenham@umn.edu> |
| Maintainer | Ryan C. Sartor <sartorry@gmail.com> |
| License | GPL (>= 2) |
| Version | 1.2 |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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