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GeneNMF: Non-Negative Matrix Factorization for Single-Cell Omics
A collection of methods to extract gene programs from single-cell gene expression data using non-negative matrix factorization (NMF). 'GeneNMF' contains functions to directly interact with the 'Seurat' toolkit and derive interpretable gene program signatures.
Getting started
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Package details |
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| Author | Massimo Andreatta [aut, cre] (<https://orcid.org/0000-0002-8036-2647>), Santiago Carmona [aut] (<https://orcid.org/0000-0002-2495-0671>) |
| Maintainer | Massimo Andreatta <massimo.andreatta@unil.ch> |
| License | GPL-3 |
| Version | 0.6.2 |
| URL | https://github.com/carmonalab/GeneNMF |
| Package repository | View on CRAN |
| Installation |
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