API for GeneNMF
Non-Negative Matrix Factorization for Single-Cell Omics
| Global functions | |
|---|---|
| cosineSimilarity | Source code |
| downsampleMin | Source code |
| dropMetaPrograms | Man page Source code |
| findHVG | Source code |
| findVariableFeatures_wfilters | Man page Source code |
| geneList2table | Source code |
| getDataMatrix | Man page Source code |
| getEntropy | Source code |
| getMetaPrograms | Man page Source code |
| getNMFgenes | Man page Source code |
| get_metaprogram_consensus | Source code |
| get_metaprogram_metrics | Source code |
| jaccardIndex | Source code |
| jaccardSimilarity | Source code |
| multiNMF | Man page Source code |
| multiPCA | Man page Source code |
| nonNegativePCA | Source code |
| normVector | Source code |
| plotMetaPrograms | Man page Source code |
| runGSEA | Man page Source code |
| runNMF | Man page Source code |
| sampleObj | Man page |
| weightCumul | Source code |
| weightedLoadings | Source code |
| wgtLoad | Source code |
