Man pages for GeneNMF
Non-Negative Matrix Factorization for Single-Cell Omics
| dropMetaPrograms | Drop meta-programs |
| findVariableFeatures_wfilters | Find variable features |
| getDataMatrix | Extract data matrix from Seurat object |
| getMetaPrograms | Extract consensus gene programs (meta-programs) |
| getNMFgenes | Get list of genes for each NMF program |
| multiNMF | Run NMF on a list of Seurat objects |
| multiPCA | Run PCA on a list of Seurat objects |
| plotMetaPrograms | Visualizations for meta-programs |
| runGSEA | Run Gene set enrichment analysis |
| runNMF | Compute NMF as a low-dim embedding for Seurat |
| sampleObj | Sample dataset to test GeneNMF installation |
