API for JPSurv
Joinpoint Model for Relative and Cause-Specific Survival
| Global functions | |
|---|---|
| .CoxFit | Source code |
| .Get.integerlist | Source code |
| .GetBestJP | Source code |
| .GetJP | Source code |
| .Handle.op | Source code |
| .addQuoteIfSpaceAtEnd | Source code |
| .assignColNames | Source code |
| .assignItemValueToSecInfoVar | Source code |
| .calcDerivPredCum | Source code |
| .calcDerivPredInt | Source code |
| .catStr | Source code |
| .covert.numeric | Source code |
| .create.emptyDataFrame.string | Source code |
| .deleteLastInterval.onecorhot | Source code |
| .getIntervalX | Source code |
| .getLevels.keeporder | Source code |
| .getLevels.keeporder.data.frame | Source code |
| .getReadingOptionFromExportOption | Source code |
| .getRowAsVector | Source code |
| .getSeAapc | Source code |
| .getSegX | Source code |
| .getSubDataByVarName | Source code |
| .getsubset.byvar | Source code |
| .is.anytrue | Source code |
| .is.anytrue.list | Source code |
| .is.empty | Source code |
| .is.substring | Source code Source code |
| .is.substring.vector | Source code Source code |
| .is.substring.vectoronvector | Source code |
| .isequal.vector | Source code |
| .prepareDICInfoAndData | Source code |
| .read.SeerStat | Source code |
| .read.SeerStatDIC | Source code |
| .read.SeerStatTXT | Source code |
| .removeACharAll | Source code |
| .removeQuoteAll | Source code |
| .replaceLabOrNum | Source code |
| .search.substr | Source code |
| .string.cutSubStringFileExtension | Source code |
| .string.trimleadingtrailing | Source code |
| .substituteColNames | Source code |
| .write.SeerStatDIC | Source code |
| .write.SeerStatDIC.section | Source code |
| .write.SeerStatTXT | Source code |
| GetApc | Source code |
| Indv_bic | Source code |
| JPSurv | Man page |
| JPSurv-package | Man page |
| Plot.dying.year.annotate | Man page Source code |
| Plot.surv.int.multiyears | Man page Source code |
| Plot.surv.year.annotate | Man page Source code |
| Predict | Source code |
| aapc | Man page Source code |
| aapc.multiints | Man page Source code |
| aapc.multiints_OLD | Source code |
| aapc.update.interval | Source code |
| aapc_OLD | Source code |
| applyStartToData | Source code |
| breast.example | Man page |
| calcCondSurvVariance | Source code |
| calcCovPred | Source code |
| calcJacobPred | Source code |
| checkDataObjects | Source code |
| check_add.data.cols | Source code |
| check_data | Source code |
| check_dataVar | Source code |
| check_dataframe | Source code |
| check_end.interval | Source code |
| check_file | Source code |
| check_fit.uncond | Source code |
| check_formula | Source code |
| check_integer | Source code |
| check_intervals | Source code |
| check_intvec | Source code |
| check_jp.relaxPropObj | Source code |
| check_legend.pos | Source code |
| check_logical | Source code |
| check_max.cutpoint | Source code |
| check_njp | Source code |
| check_numeric | Source code |
| check_numvec | Source code |
| check_op | Source code |
| check_subset | Source code |
| check_var | Source code |
| computeCondSurv.fit | Source code |
| computeCondSurv.fit0 | Source code |
| cond.getFileInfo | Source code |
| cond.modify.dic.file | Source code |
| cond_modifyData | Source code |
| cond_se | Source code |
| cond_se_1year | Source code |
| cond_se_1year.int | Source code |
| default.list | Source code |
| deleteLastInterval | Source code |
| dic.changeIntervals | Source code |
| dic.changeLineValue | Source code |
| dic.changeNumOfInt | Source code |
| dic.changeYearDiag | Source code |
| dic.getChunk | Source code |
| dic.getChunkRange | Source code |
| dic.getColnames | Source code |
| dic.getDelimiter | Source code |
| dic.getDiagYears | Source code |
| dic.getFollowUpYear | Source code |
| dic.getIntervals | Source code |
| dic.getLineNumber | Source code |
| dic.getLineNumbers | Source code |
| dic.getLineValue | Source code |
| dic.getMaxDiagYear | Source code |
| dic.getMaxInterval | Source code |
| dic.getNumberOfInts | Source code |
| dic.scanfile | Source code |
| dictionary.overview | Man page Source code |
| download.data | Man page Source code |
| find.life.page.val | Source code |
| fit1 | Man page |
| fit2 | Man page |
| fit3 | Man page |
| getDataCols | Source code |
| getDataFile | Source code |
| getDataForJP_relax | Source code |
| getDataForJoinpoint | Source code |
| getDataNrows | Source code |
| getDataVec | Source code |
| getDicFile | Source code |
| getErrorMsgFromTryError | Source code |
| getOption | Source code |
| getVecFromStr | Source code |
| input.valid | Man page Source code |
| isNumber | Source code |
| isString | Source code |
| joinpoint | Man page Source code |
| joinpoint.choose.cutpoint | Man page Source code |
| joinpoint.cond | Man page Source code |
| joinpoint.cond_main | Source code |
| joinpoint.conditional | Man page Source code |
| joinpoint.relaxProp | Man page Source code |
| joinpoint.seerdata | Man page Source code |
| joinpoint_OLD | Source code |
| jp.checkProbVec | Source code |
| jp.choose.cutpoint.main | Source code |
| jp.cond.getEstSE.1yr | Source code |
| jp.cond.main | Source code |
| jp.cond.setMiss | Source code |
| jp.cond.setReturn | Source code |
| jp.plot.cond.year | Man page Source code |
| jp.plot.death | Man page Source code |
| jp.plot.surv | Man page Source code |
| jp.set.miss.to.last | Source code |
| jp_addDataCols | Source code |
| jp_relax_BIC | Source code |
| jp_relax_compute_BIC | Source code |
| jp_relax_compute_BIC0 | Source code |
| jp_relax_compute_BIC_from_Fit | Source code |
| jp_relax_initRes | Source code |
| jp_relax_main | Source code |
| jp_relax_minBIC | Source code |
| jp_relax_saveRes | Source code |
| jp_relax_setLabel | Source code |
| jp_relax_setReturn | Source code |
| orderDataByIntYear | Source code |
| parseDelimVec | Source code |
| parseDelimVec0 | Source code |
| removeWhiteSpace | Source code |
| subsetDataForJoinpoint | Source code |
| subsetDataObj | Source code |
| subsetStr1 | Man page |
| subsetStr2 | Man page |
| subsetStr3 | Man page |
| updateIntervalVec | Source code |
| write.SeerStat | Source code |
