Files in LTFGRS

Implementation of Several Phenotype-Based Family Genetic Risk Scores

NEWS.md README.md R/RcppExports.R R/Internal_Functions.R R/Estimation_functions.R R/Kendler_functions.R R/PA_algorithm.R R/Simulate_under_LTM.R R/Gibbs_Sampler.R R/LTFGRS-package.R R/internal_validating_fuctions.R R/Graph_Helper_Functions.R R/Covariance_Matrix_Functions.R R/graph_to_trio.R R/LTFH_Gibbs_based.R R/Estimate_Liabilities.R R/Helper_Functions.R R/Prepare_Graph_Input.R inst/doc/LTFGRS_workflow_prediction.R inst/doc/LTFGRS_workflow_prediction.Rmd tests/testthat.R tests/testthat/test-Helper-Functions.R tests/testthat/test-Gibbs-sampler.R tests/testthat/test-Covariance-Matrix-Functions.R vignettes/LTFGRS_workflow_prediction.Rmd man/familywise_attach_attributes.Rd man/estimate_liability.Rd man/graph_based_covariance_construction_multi.Rd man/convert_age_to_thresh.Rd man/convert_format.Rd man/convert_age_to_cir.Rd man/graph_based_covariance_construction.Rd man/LTFGRS-package.Rd man/get_all_combs.Rd man/tnorm_mean.Rd man/simulate_under_LTM_single.Rd man/construct_covmat.Rd man/kendler_family_calculations.Rd man/construct_covmat_single.Rd man/attach_attributes.Rd man/graph_to_trio.Rd man/PA_algorithm.Rd man/extract_estimation_info_graph.Rd man/fixSexCoding.Rd man/convert_liability_to_aoo.Rd man/rtmvnorm.gibbs.Rd man/prepare_thresholds.Rd man/simulate_under_LTM.Rd man/kendler.Rd man/estimate_gen_liability_ltfh.Rd man/familywise_censoring.Rd man/get_family_graphs.Rd man/Gibbs_estimator.Rd man/estimate_liability_single.Rd man/convert_cir_to_age.Rd man/tnorm_mixture_conditional.Rd man/truncated_normal_cdf.Rd man/correct_positive_definite.Rd man/censor_family_onsets.Rd man/construct_covmat_multi.Rd man/get_onset_time.Rd man/extract_estimation_info_tbl.Rd man/prepare_graph.Rd man/estimate_liability_multi.Rd man/convert_observed_to_liability_scale.Rd man/get_relatedness.Rd man/simulate_under_LTM_multi.Rd man/get_covmat.Rd man/tnorm_var.Rd