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MAAPER: Analysis of Alternative Polyadenylation Using 3' End-Linked Reads
A computational method developed for model-based analysis of alternative polyadenylation (APA) using 3' end-linked reads. It accurately assigns 3' RNA-seq reads to polyA sites through statistical modeling, and generates multiple statistics for APA analysis. Please also see Li WV, Zheng D, Wang R, Tian B (2021) <doi:10.1186/s13059-021-02429-5>.
Getting started
Browse package contents
Package details |
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| Author | Wei Vivian Li [aut, cre] (<https://orcid.org/0000-0002-2087-2709>) |
| Maintainer | Wei Vivian Li <vivian.li@rutgers.edu> |
| License | GPL-3 |
| Version | 1.1.1 |
| URL | https://github.com/Vivianstats/MAAPER https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02429-5 |
| Package repository | View on CRAN |
| Installation |
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