Man pages for MixviR
Analysis and Exploration of Mixed Microbial Genomic Samples
| add_depths_to_ref | Add Read Depths To Ref |
| call_mutations | Identify Variants From A Potentially Mixed Sample |
| create_ref | Create MixVir-formatted reference genome object |
| estimate_lineages | Estimate Lineage Proportions In Samples |
| explore_mutations | MixviR Shiny Dashboard |
| get_codons | Get Codons From Gene Sequence |
| id_indels | ID Indel-based Amino Acid Changes |
| id_snps | ID SNV-based Amino Acid Changes |
| vcf_to_mixvir | Convert Sample VCF to MixviR Input Format |
