Man pages for NBPSeq
Negative Binomial Models for RNA-Sequencing Data
| arab | Arabidopsis RNA-Seq Data Set |
| estimate.disp | Fit a parametric disperison model to thinned counts |
| estimate.dispersion | Estimate Negative Binomial Dispersion |
| estimate.norm.factors | Estiamte Normalization Factors |
| exact.nb.test | Exact Negative Binomial Test for Differential Gene Expression |
| irls.nb.1 | Estimate the regression coefficients in an NB GLM model |
| nb.glm.test | Fit Negative Binomial Regression Model and Test for a... |
| NBPSeq-package | Negative Binomial Regression Models for Statistical Analysis... |
| nbp.test | NBP Test for Differential Gene Expression from RNA-Seq Counts |
| plot.nb.data | Boxplot and scatterplot matrix of relative frequencies (after... |
| plot.nb.dispersion | Plot the estimated dispersion as a function of the... |
| plot.nbp | Diagnostic Plots for an NBP Object |
| prepare.nb.data | Prepare the NB Data Structure for RNA-Seq Read Counts |
| prepare.nbp | Prepare the Data Structure for Exact NB test for Two-Group... |
| print.nb.data | Print summary of the nb counts |
| print.nb.dispersion | Print the estimated dispersion model |
| print.nbp | Print summary of an NBP Object |
| print.nb.test | Print output from 'test.coefficient' |
| test.coefficient | Large-sample Test for a Regression Coefficient in an Negative... |
