API for Nematode
Ecological Indices Calculator for Nematode Communities

Global functions
.anosim Source code
.cmdscale Source code
.onAttach Source code Source code
.onLoad Source code
Ecological.Indices Man page
Ecological.Indices.data.frame Man page
Ecological.Indices.default Man page
Ecological.Indices.matrix Man page
NEF Man page Source code
NEF.data.frame Man page Source code
NEF.default Man page Source code
NEF.matrix Man page Source code
NMF Man page Source code
NMF.data.frame Man page Source code
NMF.default Man page Source code
NMF.matrix Man page Source code
cal.BI Man page
cal.BI.data.frame Man page
cal.BI.default Man page
cal.BI.matrix Man page
cal.CI Man page
cal.CI.data.frame Man page
cal.CI.default Man page
cal.CI.matrix Man page
cal.EI Man page
cal.EI.data.frame Man page
cal.EI.default Man page
cal.EI.matrix Man page
cal.H Man page Source code
cal.H.data.frame Man page Source code
cal.H.default Man page
cal.H.matrix Man page
cal.J Man page
cal.J.data.frame Man page
cal.J.default Man page
cal.J.matrix Man page
cal.MI Man page
cal.MI.data.frame Man page
cal.MI.default Man page
cal.MI.matrix Man page
cal.NCR Man page
cal.NCR.data.frame Man page
cal.NCR.default Man page
cal.NCR.matrix Man page
cal.PPI Man page
cal.PPI.data.frame Man page
cal.PPI.default Man page
cal.PPI.matrix Man page
cal.SI Man page
cal.SI.data.frame Man page
cal.SI.default Man page
cal.SI.matrix Man page
cal.SRI Man page
cal.SRI.data.frame Man page
cal.SRI.default Man page
cal.SRI.matrix Man page
cal.Simpson Man page Source code
cal.Simpson.data.frame Man page Source code
cal.Simpson.default Man page Source code
cal.Simpson.matrix Man page Source code
cal.TD Man page Source code
cal.TD.data.frame Man page Source code
cal.TD.default Man page Source code
cal.TD.matrix Man page Source code
cal.WI Man page
cal.WI.data.frame Man page
cal.WI.default Man page
cal.WI.matrix Man page
check_nematode_genus Man page Source code
check_nematode_genus.character Man page Source code
check_nematode_genus.data.frame Man page Source code
check_nematode_genus.default Man page Source code
diet_rel_abundance Man page Source code
diet_rel_abundance.data.frame Man page Source code
diet_rel_abundance.default Man page Source code
diet_rel_abundance.matrix Man page Source code
fuzzy_genus_match Man page Source code
nematode.ave.mass Man page
nematode.info Man page
num_species Man page Source code
num_species.data.frame Man page Source code
num_species.default Man page Source code
num_species.matrix Man page Source code
rel_abundance Man page Source code
rel_abundance.data.frame Man page Source code
rel_abundance.default Man page Source code
rel_abundance.matrix Man page Source code
runNMDS Man page Source code
runNMDS.data.frame Man page Source code
runNMDS.default Man page Source code
runNMDS.matrix Man page Source code
runPCoA Man page Source code
runPCoA.data.frame Man page Source code
runPCoA.default Man page Source code
runPCoA.matrix Man page Source code
runSimper Man page
runSimper.Ordination Man page
runSimper.default Man page
summary.NMDS Man page Source code
summary.PCoA Man page Source code
Nematode documentation built on Aug. 21, 2025, 5:58 p.m.