Files in OmicFlow
Fast and Efficient (Automated) Analysis of Sparse Omics Data
MD5
NAMESPACE
DESCRIPTION
LICENSE
R/plot_pairwise_stats.R
R/OmicFlow-package.R
R/omics-class.R
R/diversity.R
R/metagenomics-class.R
R/proteomics-class.R
R/foldchange.R
R/pairwise_adonis.R
R/ordination_plot.R
R/composition_plot.R
R/diversity_plot.R
R/colormap.R
R/volcano_plot.R
R/pairwise_anosim.R
R/hill_taxa.R
R/utils.R
inst/report.Rmd
inst/metadata_schema.json
inst/styles.css
inst/extdata/mock_taxa.rds
inst/extdata/metadata.tsv
inst/extdata/features.tsv
inst/extdata/counts.tsv
tests/testthat.R
tests/testthat/test-utils.R
tests/testthat/test-composition.R
tests/testthat/test-hill.R
tests/testthat/test-autoflow.R
tests/testthat/test-transformations.R
tests/testthat/test-subsetting.R
tests/testthat/test-alpha_diversity.R
tests/testthat/test-dfe.R
tests/testthat/test-metagenomics.R
tests/testthat/test-write_biom.R
tests/testthat/test-ordination.R
tests/testthat/input/metagenomics/metadata.tsv
tests/testthat/input/metagenomics/biom_with_taxonomy_json.biom
tests/testthat/input/metagenomics/biom_with_taxonomy_hdf5.biom
tests/testthat/input/metagenomics/rooted_tree.newick
exec/autoFlow.R
man/read_rarefraction_qiime.Rd
man/plot_pairwise_stats.Rd
man/colormap.Rd
man/sparse_to_dtable.Rd
man/foldchange.Rd
man/pairwise_anosim.Rd
man/column_exists.Rd
man/volcano_plot.Rd
man/diversity_plot.Rd
man/composition_plot.Rd
man/hill_taxa.Rd
man/diversity.Rd
man/omics.Rd
man/proteomics.Rd
man/metagenomics.Rd
man/pairwise_adonis.Rd
man/OmicFlow-package.Rd
man/ordination_plot.Rd
