Man pages for Rtapas
Random Tanglegram Partitions
| amph_trem | amph_trem dataset |
| assoc_mat | Create an host-symbiont association matrix |
| geo_D | Geodesic distance between trees |
| gini_ci | Plot the confidence intervals of Gini coefficient |
| gini_RSV | The Gini coefficient adjusted for negative attributes... |
| linkf_CI | Confidence intervals for the frequency of host-symbiont... |
| link_freq | Frequency of host-symbiont association |
| max_cong | Algortihm for maximizing congruence between two phylogenies |
| max_incong | Algortihm for maximizing incongruence between two phylogenies |
| nuc_cp | Nuclear and chloroplast dataset of orchids |
| one2one_f | Maximum number of unique one-to-one association over a number... |
| paco_ss | Procrustes Approach to Cophylogeny (PACo) of the host and... |
| paraF | Test of host-symbiont coevolution |
| prob_statistic | Frequencies of the associations for the posterior probability... |
| tangle_gram | Tanglegram of the host-symbiont frequencies |
| trimHS_maxC | Trims the H-S association matrix maximizing the congruence |
| trimHS_maxI | Trims the H-S association matrix maximizing the incongruence |
