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SEAA: Splicing Efficiency Analysis and Annotation
The aim of 'SEAA' is to provide convenient and rapid splicing efficiency calculation and splicing sites annotation function using next generation sequencing data. Aligned files and a processed splicing sites annotation file are needed. The task can be finished in several minutes using multi-core computing with the assistance of 'Rsubread'. Plots of splicing status type and Cumulative Distribution Function (CDF) and annotated valid splicing efficiency can be exported.
Getting started
Browse package contents
Package details |
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| Author | Zixiang Wang [aut, cre] (<https://orcid.org/0000-0001-5252-9764>), Zhaojian Liu [aut] |
| Maintainer | Zixiang Wang <wangzixiang@mail.sdu.edu.cn> |
| License | GPL (>= 3) |
| Version | 0.9.6 |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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