API for SpaCCI
Spatially Aware Cell-Cell Interaction Analysis
| Global functions | |
|---|---|
| DB_dataframe | Man page |
| Find_regional_IDs | Man page Source code |
| GetShuffledCT | Man page Source code |
| Global_Permutations | Man page Source code Source code |
| LR_database | Man page Source code |
| Local_Regional_Permutations | Man page Source code Source code |
| SpaCCI_global | Man page Source code |
| SpaCCI_local | Man page Source code |
| SpaCCI_region | Man page Source code |
| plot_SpaCCI_chordDiagram | Man page Source code |
| plot_SpaCCI_heatmap | Man page Source code |
| plot_SpaCCI_local | Man page Source code |
| plot_SpaCCI_local_Strength | Man page Source code |
| plot_Strength_Seurat | Man page Source code |
| plot_Strength_localized | Man page Source code |
| plot_localized | Man page Source code |
| plot_localized_Seurat | Man page Source code |
| possible_L_R_pairs_Cellinker | Man page Source code |
| possible_L_R_pairs_ICELLNET | Man page Source code |
| possible_L_R_pairs_cellchat | Man page Source code |
| possible_L_R_pairs_cellphoneDB | Man page Source code |
| possible_L_R_pairs_connectome | Man page Source code |
| random_region | Man page Source code |
| result_global | Man page |
| result_local | Man page |
| result_local_spatial_coords_df | Man page |
| result_regional | Man page |
| run_SpaCCI | Man page Source code |
| scPalette | Man page Source code |
| self_identified_LR | Man page Source code |
| test_data | Man page |
