Files in SpaCCI
Spatially Aware Cell-Cell Interaction Analysis
MD5
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/visiualization.R
R/database.R
R/result_local_spatial_coords_df.R
R/test_data.R
R/DB_dataframe.R
R/permutation.R
R/result_regional.R
R/result_local.R
R/run_SpaCCI.R
R/modeling.R
R/utils.R
R/result_global.R
src/Makevars
src/RcppExports.cpp
src/permutation_func.cpp
inst/extdata/ConnectomeDB_2020_Human_interactions.RData
inst/extdata/CellChatDB.rda
inst/extdata/ICELLNET_Human_interactions.csv
inst/extdata/Tutorial_example_data.rda
inst/extdata/test_data.rda
inst/extdata/Cellinker_Human_interactions.txt
inst/extdata/cellphoneDB_interactions.csv
inst/extdata/Cellinker_Mouse_interactions.txt
data/result_local.rda
data/result_regional.rda
data/result_global.rda
data/test_data.rda
data/result_local_spatial_coords_df.rda
data/DB_dataframe.rda
man/test_data.Rd
man/Local_Regional_Permutations.Rd
man/Global_Permutations.Rd
man/run_SpaCCI.Rd
man/plot_localized_Seurat.Rd
man/plot_SpaCCI_local.Rd
man/result_global.Rd
man/Find_regional_IDs.Rd
man/plot_localized.Rd
man/plot_Strength_Seurat.Rd
man/plot_SpaCCI_heatmap.Rd
man/plot_SpaCCI_local_Strength.Rd
man/DB_dataframe.Rd
man/LR_database.Rd
man/result_local.Rd
man/possible_L_R_pairs_cellchat.Rd
man/result_local_spatial_coords_df.Rd
man/possible_L_R_pairs_connectome.Rd
man/random_region.Rd
man/self_identified_LR.Rd
man/possible_L_R_pairs_ICELLNET.Rd
man/SpaCCI_local.Rd
man/possible_L_R_pairs_Cellinker.Rd
man/plot_SpaCCI_chordDiagram.Rd
man/possible_L_R_pairs_cellphoneDB.Rd
man/scPalette.Rd
man/plot_Strength_localized.Rd
man/GetShuffledCT.Rd
man/SpaCCI_global.Rd
man/result_regional.Rd
man/SpaCCI_region.Rd
