Man pages for TimeDepFrail
Time Dependent Shared Frailty Cox Model
| AdPaik_1D | One-Dimensional Analysis of log-Likelihood Function |
| AdPaikModel | Adapted Paik et Al.'s Model: Time-Dependent Shared Frailty... |
| bas_hazard | Baseline Hazard Step-Function |
| bas_hazard_internal | Internal Function for the Baseline Hazard Step-Function |
| check.categories_params | Check Correctness of Parameters Categories |
| check.centre | Check Correctness for the Cluster Variable |
| check.C_mult | Check Positivity of the Multiplicative Constant C |
| check.dataset | Check Presence of NULL or NaN Element Value in the Dataset |
| check.flag_optimal_params | Check Coherence Between Flag for Optimal Parameters and... |
| check.formula_terms | Check Correctness of Formula Terms |
| check.frailty_dispersion | Check Correctness of Frailty Standard Deviation |
| check.index | Check Existence of Provided Input Index |
| check.pchtype_colorbg | Check Correctness of Plot Variables Pch and Color |
| check.pos_frailty_sd | Check Positivity of the Frailty Standard Deviation |
| check.poslegend | Check Correctness of Legend Position |
| check.post_frailty_centre | Check Numerosity of Posterior Frailty Estimates |
| check.range_params | Check Correctness of Input Parameters |
| check.result | Check Structure of the 'AdPaikModel' Output |
| check.structure_paramsCI | Check Structure for the Parameters Confidence Interval |
| check.structure_post_frailty_est | Check Structure of Posterior Frailty Estimates |
| check.structure_post_frailty_var | Check Structure of Posterior Frailty Variances |
| check.time_axis | Check Correctness of Time Domain Subdivision |
| check.value_post_frailty | Check Non-Negativeness of the Posterior Frailty Estimates |
| coef.AdPaik | Extract the Coefficients for the 'Adapted Paik et Al.' Model |
| coefseAdPaik | Extracts the Standard Errors of the Coefficients for the... |
| confint.AdPaik | Extracts the Confidence Intervals for the Coefficients for... |
| data_dropout | Dropout Dataset |
| extractAIC.AdPaik | Extract AIC for 'AdPaik' Objects |
| extract_dummy_variables | Transform Categorical Covariate into Dummy Variables |
| extract_event_data | Extracting Variables for Posterior Frailty Estimates... |
| frailty_sd | Frailty Standard Deviation and Variance for the 'Adapted Paik... |
| frailty_Sd_internal | Internal Function for Frailty Standard Deviation for the... |
| ll_AdPaik_1D | One-Dimensional Log-Likelihood Function to be Optimized |
| ll_AdPaik_centre_1D | One-Dimensional Group log-Likelihood Function |
| ll_AdPaik_centre_eval | Evaluation of Model Group log-Likelihood |
| ll_AdPaik_eval | Evaluation of Model log-Likelihood |
| logLik.AdPaik | Extract Log-Likelihood for 'AdPaik' Objects |
| nobs.AdPaik | Extract Number of Observations for 'AdPaik' |
| params_CI | Confidence Interval for the Optimal Estimated Parameters |
| params_se | Standard Error of the Parameters |
| plot.AdPaik | Plots Related to the the 'Adapted Paik et Al.' Model |
| plot_bas_hazard | Plot the Baseline Hazard Step-Function |
| plot_frailty_sd | Plot for the Frailty Standard Deviation or Variance |
| plot_ll_1D | Plot the One-Dimensional Log-Likelihood Function |
| plot_post_frailty_est | Plot the Posterior Frailty Estimates |
| plot_post_frailty_var | Plot the Posterior Frailty Variances |
| plot_survivalAdPaik | Plot of Conditional Survival Function |
| post_frailty_CI_internal | Confidence Interval for Posterior Frailty Estimates |
| post_frailty_confint | Posterior Frailty Confidence Intervals |
| post_frailty_est | Posterior Frailty Estimates |
| post_frailty_internal | Posterior Frailty Estimates and Variances for the 'Adapted... |
| post_frailty_var | Posterior Frailty Variances |
| print.AdPaik | Print method for AdPaik objects |
| print.summary.AdPaik | Print Method for summary.AdPaik Objects |
| summary.AdPaik | Summary Method for AdPaik Objects |
| survivalAdPaik | Compute the Conditional Survival Function |
| time_int_eval | Resolution of Integral with Respect to Time |
