API for Virusparies
Visualize and Process Output from 'VirusHunterGatherer'
| Global functions | |
|---|---|
| .onAttach | Source code |
| CombineHittables | Man page Source code |
| ExportVirusDataFrame | Man page Source code |
| ExportVirusGt | Man page Source code |
| ExportVirusPlot | Man page Source code |
| ImportVirusTable | Man page Source code |
| SummarizeViralStats | Man page Source code |
| VgConLenViolin | Man page Source code |
| VhgAddPhylum | Man page Source code |
| VhgBoxplot | Man page Source code |
| VhgGetSubject | Man page Source code |
| VhgIdenFacetedScatterPlot | Man page Source code |
| VhgIdentityScatterPlot | Man page Source code |
| VhgPreprocessTaxa | Man page Source code |
| VhgRunsBarplot | Man page Source code |
| VhgRunsTable | Man page Source code |
| VhgSubsetHittable | Man page Source code |
| VhgSumHitsBarplot | Man page Source code |
| VhgTabularRasa | Man page Source code |
| Virusparies | Man page |
| Virusparies-package | Man page |
| adjust_plot_angles | Source code |
| arg_character | Source code |
| arg_logical | Source code |
| arg_numeric_or_integer | Source code |
| boxp_summary_stats | Source code |
| check_columns | Source code |
| check_input_type | Source code |
| check_is_dataframe | Source code |
| consistentColourPalette | Source code |
| facet_plot | Source code |
| filter_specific_group | Source code |
| find_outlier_eval_box | Source code |
| format_ICTV | Source code |
| get_most_common_taxonomic_rank | Source code |
| get_plot_parameters | Man page Source code |
| has_columnnames | Source code |
| is_file_empty | Source code |
| plot_boxplot_message | Source code |
| preprocess_runs_bar | Source code |
| process_chunk | Source code |
| remove_group_text | Source code |
| remove_non_group | Source code |
| select_theme | Source code |
| taxonomy_rank_hierarchy | Source code |
| vh_sumhitbar_preprocessing | Source code |
| vhg_filter_belowthresholdboxplot | Source code |
