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aPEAR: Advanced Pathway Enrichment Analysis Representation
Simplify pathway enrichment analysis results by detecting clusters of similar pathways and visualizing it as an enrichment network, where nodes and edges describe the pathways and similarity between them, respectively. This reduces the redundancy of the overlapping pathways and helps to notice the most important biological themes in the data (Kerseviciute and Gordevicius (2023) <doi:10.1101/2023.03.28.534514>).
Getting started
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Package details |
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| Author | Ieva Kerseviciute [aut, cre] (<https://orcid.org/0000-0002-9353-038X>), Juozas Gordevicius [ths] (<https://orcid.org/0000-0003-3190-6721>), VUGENE, LLC [cph, fnd] |
| Maintainer | Ieva Kerseviciute <kerseviciute.ieva@gmail.com> |
| License | MIT + file LICENSE |
| Version | 1.0.0 |
| URL | https://gitlab.com/vugene/aPEAR |
| Package repository | View on CRAN |
| Installation |
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