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autoGO: Auto-GO: Reproducible, Robust and High Quality Ontology Enrichment Visualizations
Auto-GO is a framework that enables automated, high quality Gene Ontology enrichment analysis visualizations. It also features a handy wrapper for Differential Expression analysis around the 'DESeq2' package described in Love et al. (2014) <doi:10.1186/s13059-014-0550-8>. The whole framework is structured in different, independent functions, in order to let the user decide which steps of the analysis to perform and which plot to produce.
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Package details |
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| Author | Isabella Grassucci [aut] (<https://orcid.org/0000-0002-2484-8570>), Eleonora Sperandio [aut] (<https://orcid.org/0000-0002-8572-6788>), Fabio Ticconi [cre] (<https://orcid.org/0000-0001-8905-6657>), Alice Massacci [aut] (<https://orcid.org/0000-0001-7780-809X>), Lorenzo D'Ambrosio [aut] (<https://orcid.org/0000-0002-9656-7436>), Matteo Pallocca [aut] (<https://orcid.org/0000-0002-7756-3579>) |
| Maintainer | Fabio Ticconi <fabio.ticconi@gmail.com> |
| License | MIT + file LICENSE |
| Version | 1.0.1 |
| Package repository | View on CRAN |
| Installation |
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