babelwhale | Talking to both Docker and Singularity containers from R |
copy_file | Copy a file from a container to the host system |
create_config | Backend configuration for containerisation |
list_docker_images | List docker containers |
pull_container | Pull a container from dockerhub |
read_file | Read a file from a container |
run | Run a containerised command, and wait until finished |
run_auto_mount | Run a containerised command with automatic mounting of files |
singularity_image_path | Determine the cached path of singularity images |
test_docker_installation | Tests whether docker is correctly installed and available |
test_singularity_installation | Tests whether singularity is correctly installed and... |
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