Man pages for bonsaiforest
Shrinkage Based Forest Plots
| ahr_estimation | Average Hazard Ratio Estimation |
| ahr_from_km | Average Hazard Estimation based on Kaplan-Meier Estimates |
| bonsaiforest-package | bonsaiforest: Shrinkage Based Forest Plots |
| compare | Compare Treatment Estimate Methods |
| cut_norm_quant | Helper for Cutting into Normal Quantiles |
| design_dummy1 | Design Dummy Subgroup x_1a |
| design_matrix1 | Design Matrix Subgroup x_1a |
| elastic_net | Elastic Net Penalization Model Estimation |
| elastic_net_fit_bin | Elastic Net Fit Binary |
| elastic_net_fit_surv | Elastic Net Fit Survival |
| elastic_net_surv | H0, Coefficients Elastic Net Survival Model and Matrices |
| est_coef_bin1 | Estimated coefficients elastic net Binary |
| example_data | Example data |
| generate_stacked_data | Generation of Stacked Data by Subgroups |
| horseshoe | Bayesian Shrinkage Model Estimation |
| horseshoe_fit_bin | Horseshoe Fit Binary |
| horseshoe_fit_surv | Horseshoe Fit Survival |
| km_fun | Helper Function to get Kaplan-Meier Estimate |
| lor_estimation | Estimation of Log-Odds Ratio |
| naive | Naive Model Estimation |
| naive_fit_bin | Naive Fit Binary |
| naive_fit_surv | Naive Fit Survival |
| naivepop | Naive Overall Population Model Estimation |
| naivepop_fit_bin | Naivepop Fit Binary |
| naivepop_fit_surv | Naivepop Fit Survival |
| plot.compare.data | Compare Forest Plots |
| plot.summary.elastic_net | Forest plot Summary Elastic Net |
| plot.summary.horseshoe | Forest plot Summary Horseshoe |
| plot.summary.naive | Forest plot Summary Naive |
| preprocess | Data Preprocessing |
| print.summary.elastic_net | Print Function for Elastic Net Summary |
| print.summary.horseshoe | Print Function for Horseshoe Summary |
| print.summary.naive | Print Function for Naive Summary |
| print.summary.naivepop | Print Function for Naivepop Summary |
| simul_covariates | Generation of a Design Matrix for Simulations |
| simul_data | Simulate Covariates and Progression Free Survival Data |
| simul_pfs | Simulation of Progression Free Survival Times |
| subgroups | Subgroup Treatment Effect |
| summary.elastic_net | Summary Elastic Net Function |
| summary.horseshoe | Summary Horseshoe Function |
| summary.naive | Summary Naive |
| summary.naivepop | Summary Naivepop Function |
| survival_curves | Average Survival Curves |
| trt_horseshoe | Subgroup Treatment Effect Horseshoe |
