API for caretSDM
Build Species Distribution Modeling using 'caret'
| Global functions | |
|---|---|
| .add_predictors | Source code |
| .adjust_bbox | Source code |
| .adjust_cell_id_name | Source code |
| .adjust_geom_col | Source code |
| .attribute_bioclim_to_rivers | Source code |
| .check_sdm_area | Source code |
| .detect_sdm_area | Source code |
| .find_closest_matches | Source code |
| .find_columns | Source code |
| .input_sdm | Source code |
| .is_float | Source code |
| .is_gdal_installed | Source code |
| .is_integer | Source code |
| .is_line_string | Source code |
| .make_full_grid | Source code |
| .models | Source code |
| .mstopOrPush | Source code |
| .occurrences | Source code |
| .predictions | Source code |
| .pseudoabsences | Source code |
| .sdm_area | Source code |
| .sdm_area_from_sf_using_gdal | Source code |
| .sdm_area_from_sf_using_stars | Source code |
| .sdm_area_from_stars_using_gdal | Source code |
| .sdm_area_from_stars_using_stars | Source code |
| .select_variables | Source code |
| .sf_to_df_sdm | Source code |
| .try_split | Source code |
| GBIF_data | Man page Source code |
| WorldClim_data | Man page Source code |
| add_input_sdm | Man page Source code |
| add_models | Man page Source code |
| add_occurrences | Man page Source code |
| add_predictions | Man page Source code |
| add_predictors | Man page Source code |
| add_predictors.RasterStack | Source code |
| add_predictors.SpatRaster | Source code |
| add_predictors.character | Source code |
| add_predictors.sf | Source code |
| add_predictors.stars | Source code |
| add_scenarios | Man page Source code |
| add_scenarios.NULL | Source code |
| add_scenarios.RasterStack | Source code |
| add_scenarios.SpatRaster | Source code |
| add_scenarios.stars | Source code |
| add_sdm_area | Man page Source code |
| algorithms | Man page |
| algorithms_used | Man page Source code |
| assert_character_cli | Source code |
| assert_choice_cli | Source code |
| assert_class_cli | Source code |
| assert_cli | Source code |
| assert_data_frame_cli | Source code |
| assert_directory_cli | Source code |
| assert_file_exists_cli | Source code |
| assert_int_cli | Source code |
| assert_list_cli | Source code |
| assert_logical_cli | Source code |
| assert_names_cli | Source code |
| assert_number_cli | Source code |
| assert_numeric_cli | Source code |
| assert_subset_cli | Source code |
| assert_true_cli | Source code |
| assert_vector_cli | Source code |
| bioc | Man page |
| buffer_sdm | Man page Source code |
| caretSDM | Man page |
| caretSDM-package | Man page |
| check_character_cli | Source code |
| check_class_cli | Source code |
| check_data_frame_cli | Source code |
| check_directory_cli | Source code |
| check_int_cli | Source code |
| check_list_cli | Source code |
| check_logical_cli | Source code |
| check_names_cli | Source code |
| check_number_cli | Source code |
| check_numeric_cli | Source code |
| check_vector_cli | Source code |
| data_clean | Man page Source code |
| filter.input_sdm | Man page Source code |
| filter.occurrences | Man page Source code |
| filter.sdm_area | Man page Source code |
| filter_species | Man page Source code |
| fmt_bullet_cli | Source code |
| gcms_ensembles | Man page Source code |
| get_coords | Man page Source code |
| get_ensembles | Man page Source code |
| get_models | Man page Source code |
| get_pca_model | Man page Source code |
| get_pdp_sdm | Man page Source code |
| get_predictions | Man page Source code |
| get_predictor_names | Man page Source code |
| get_predictor_names.input_sdm | Man page Source code |
| get_predictor_names.sdm_area | Man page Source code |
| get_predictors | Man page Source code |
| get_scenarios_data | Man page Source code |
| get_sdm_area | Man page Source code |
| get_tune_length | Man page Source code |
| get_validation_metrics | Man page Source code |
| input_sdm | Man page Source code |
| is_input_sdm | Man page Source code |
| is_models | Man page Source code |
| is_occurrences | Man page Source code |
| is_predictions | Man page Source code |
| is_sdm_area | Man page Source code |
| join_area | Man page Source code |
| make_assertion | Source code |
| mapview_grid | Man page Source code |
| mapview_occurrences | Man page Source code |
| mapview_predictions | Man page Source code |
| mapview_predictors | Man page Source code |
| mapview_scenarios | Man page Source code |
| mean_validation_metrics | Man page Source code |
| mutate.input_sdm | Man page Source code |
| mutate.sdm_area | Man page Source code |
| n_pseudoabsences | Man page Source code |
| n_records | Man page Source code |
| occ | Man page |
| occurrences_as_df | Man page Source code |
| occurrences_sdm | Man page Source code |
| occurrences_sdm.character | Source code |
| occurrences_sdm.data.frame | Source code |
| occurrences_sdm.sf | Source code |
| occurrences_sdm.tbl_df | Source code |
| parana | Man page |
| pca_predictors | Man page Source code |
| pca_summary | Man page Source code |
| pdp_sdm | Man page Source code |
| plot.input_sdm | Source code |
| plot.occurrences | Source code |
| plot.predictions | Source code |
| plot.sdm_area | Source code |
| plot_background | Man page Source code |
| plot_grid | Man page Source code |
| plot_niche | Man page Source code |
| plot_occurrences | Man page Source code |
| plot_predictions | Man page Source code |
| plot_predictors | Man page Source code |
| plot_scenarios | Man page Source code |
| predict_sdm | Man page Source code |
| predict_sdm.sdm_area | Source code |
| predictors | Man page Source code |
| predictors.input_sdm | Man page Source code |
| predictors.sdm_area | Man page Source code |
| print.input_sdm | Man page Source code |
| print.models | Man page Source code |
| print.occurrences | Man page Source code |
| print.predictions | Man page Source code |
| print.sdm_area | Source code |
| pseudoabsence_data | Man page Source code |
| pseudoabsence_method | Man page Source code |
| pseudoabsences | Man page Source code |
| rivs | Man page |
| salm | Man page |
| sanitize_cli | Source code |
| scen | Man page |
| scen_rs | Man page |
| scenarios_names | Man page Source code |
| sdm_area | Man page Source code |
| sdm_area.RasterStack | Source code |
| sdm_area.SpatRaster | Source code |
| sdm_area.character | Source code |
| sdm_area.sf | Source code |
| sdm_area.stars | Source code |
| sdm_as_raster | Man page Source code |
| sdm_as_stars | Man page Source code |
| sdm_as_terra | Man page Source code |
| select.input_sdm | Man page Source code |
| select.sdm_area | Man page Source code |
| select_predictors | Man page Source code |
| select_scenarios | Man page Source code |
| selected_variables | Man page Source code |
| set_predictor_names | Man page Source code |
| set_predictor_names.input_sdm | Man page Source code |
| set_predictor_names.sdm_area | Man page Source code |
| set_scenarios_names | Man page Source code |
| set_variables_names | Man page Source code |
| species_names | Man page Source code |
| summary_sdm | Man page |
| summary_sdm_presence_only | Man page Source code |
| test_variables_names | Man page Source code |
| train_sdm | Man page Source code |
| tsne_sdm | Man page Source code |
| use_esm | Man page Source code |
| use_mem | Man page Source code |
| validate_on_independent_data | Man page Source code |
| varImp_sdm | Man page Source code |
| vif_predictors | Man page Source code |
| vif_summary | Man page Source code |
| write_ensembles | Man page Source code |
| write_gpkg | Man page Source code |
| write_gpkg.sdm_area | Man page Source code |
| write_grid | Man page Source code |
| write_models | Man page Source code |
| write_occurrences | Man page Source code |
| write_predictions | Man page Source code |
| write_predictors | Man page Source code |
| write_pseudoabsences | Man page Source code |
| write_validation_metrics | Man page Source code |
