API for coalescentMCMC
MCMC Algorithms for the Coalescent
| Global functions | |
|---|---|
| .branching_times | Source code |
| .get.list.trees | Source code |
| AIC.coalescentMCMC | Man page Source code |
| BIC.coalescentMCMC | Man page Source code |
| NeighborhoodRearrangement | Man page Source code |
| NodeAgeMove | Source code |
| ScalingMove | Source code |
| TipInterchange | Man page Source code |
| anova.coalescentMCMC | Man page Source code |
| branchSwapping | Source code |
| cleanMCMCtrees | Man page Source code |
| coalescentMCMC | Man page Source code |
| dcoal | Man page Source code |
| dcoal.bsplines | Source code |
| dcoal.linear | Man page Source code |
| dcoal.step | Man page Source code |
| dcoal.time | Man page Source code |
| dcoal.time2 | Man page Source code |
| getLastTree | Man page Source code |
| getMCMCstats | Man page Source code |
| getMCMCtrees | Man page Source code |
| logLik.coalescentMCMC | Man page Source code |
| plotTHETA | Man page Source code |
| proba.coalescent | Man page Source code |
| randomWalkThetaMu | Source code |
| saveMCMCtrees | Man page Source code |
| sim.coalescent | Man page Source code |
| subset.coalescentMCMC | Man page Source code |
| subtreeExchange | Source code |
| treeOperators | Man page |
