Man pages for dartR.captive
Analysing 'SNP' Data to Support Captive Breeding

gl.assign.grmPopulation assignment using grm
gl.assign.mahalanobisAssign an individual of unknown provenance to population...
gl.assign.paEliminates populations as possible source populations for an...
gl.assign.pcaAssign an individual of unknown provenance to population...
gl.filter.parent.offspringFilters putative parent offspring within a population
gl.grmCalculates an identity by descent matrix
gl.grm.networkRepresents a genomic relationship matrix (GRM) as a network
gl.plot.networkRepresents a distance or dissimilarity matrix as a network
gl.report.parent.offspringIdentifies putative parent offspring within a population
gl.run.EMIBD9Run program EMIBD9
gl.sim.relatednessSimulate relatedness estimates.
utils.assignmentPopulation assignment probabilities
utils.assignment_2Population assignment probabilities
utils.assignment_3Population assignment probabilities
utils.assignment_4Population assignment probabilities
zzzSetting up the package dartR.popgenomics
dartR.captive documentation built on April 3, 2025, 7:34 p.m.