Man pages for ecodive
Parallel and Memory-Efficient Ecological Diversity Metrics
| bray_curtis | Bray-Curtis |
| canberra | Canberra |
| chao1 | Chao1 |
| documentation | documentation |
| euclidean | Euclidean |
| ex_counts | Example counts matrix |
| ex_tree | Example phylogenetic tree |
| faith | Faith's PD |
| generalized_unifrac | Generalized UniFrac |
| gower | Gower |
| inv_simpson | Inverse Simpson |
| jaccard | Jaccard |
| kulczynski | Kulczynski |
| manhattan | Manhattan |
| n_cpus | Number of CPU Cores |
| rarefy | Rarefy OTU counts. |
| read_tree | Read a newick formatted phylogenetic tree. |
| shannon | Shannon |
| simpson | Simpson |
| unweighted_unifrac | Unweighted UniFrac |
| variance_adjusted_unifrac | Variance Adjusted UniFrac |
| weighted_normalized_unifrac | Normalized UniFrac |
| weighted_unifrac | Weighted UniFrac |
