Man pages for ecostate
State-Space Mass-Balance Model for Marine Ecosystems
| abm3pc_sys | Adams-Bashford-Moulton for system of equations |
| add_equilibrium | Compute equilibrium values |
| compute_nll | Compute negative log-likelihood for EcoState model |
| compute_tracer | Calculate tracers, e.g., trophic level |
| dBdt | Dynamics from EcoSim |
| ddirmult | Dirichlet-multinomial |
| eastern_bering_sea | eastern Bering Sea ecosystem data |
| ecostate | fit EcoState model |
| ecostate_control | Detailed control for ecostate structure |
| ginv | Penrose-Moore pseudoinverse |
| logLik.ecostate | Marginal log-likelihood |
| ode23 | Non-stiff (and stiff) ODE solvers |
| plot_foodweb | Plot foodweb |
| print_ecopars | Print EcoSim parameters |
| print.ecostate | Print fitted ecostate object |
| rk4sys | Classical Runge-Kutta for system of equations |
| stanza_settings | Detailed control for stanza structure |
| whitehouse_2021 | Full rpath inputs for eastern Bering Sea |
