Man pages for enmpa
Ecological Niche Modeling using Presence-Absence Data
| calibration_glm | GLM calibration with presence-absence data |
| cal_res | Example of results obtained from GLM calibration using enmpa |
| enm_data | Example data used to run model calibration exercises |
| enmpa | enmpa: Ecological Niche Modeling using Presence-Absence Data |
| enmpa_calibration | Constructor of S3 objects of class enmpa_calibration |
| enmpa_fitted_models | Constructor of S3 objects of class enmpa_fitted_models |
| evaluation_stats | Summary of evaluation statistics for candidate models |
| fit_glms | Fitting selected GLMs models |
| get_formulas | Get GLM formulas according to defined response types |
| independent_eval | Evaluate final models using independent data |
| jackknife | Jackkniffe test for variable contribution |
| kfold_partition | K-fold data partitioning |
| model_selection | Selection of best candidate models considering various... |
| model_validation | Model validation options |
| niche_signal | Niche Signal detection using one or multiple variables |
| optimize_metrics | Find threshold values to produce three optimal metrics |
| plot_importance | Plot variable importance |
| plot_jk | Jackkniffe plot for variable contribution |
| plot_niche_signal | Plot Niche Signal results |
| predict_glm | Extension of glm predict to generate predictions of different... |
| predict_selected | Predictions for the models selected after calibration |
| Print a short version of elements in 'calibration' and... | |
| proc_enm | Partial ROC calculation |
| resp2var | Two-Way interaction response plot |
| response_curve | Variable response curves for GLMs |
| sel_fit | Example of selected models fitted |
| summary | Summary of 'calibration' and 'fitted models' |
| test | Example data used to test models |
| var_importance | Variable importance for GLMs |
