Man pages for ensembleTax
Ensemble Taxonomic Assignments of Amplicon Sequencing Data
| assign.ensembleTax | Computes ensemble taxonomic assignments for each ASV in an... |
| bayes.sample | Example output of dada2 assignTaxonomy function |
| bayestax2df | Converts the output of DADA2's assignTaxonomy, which... |
| gg_13_8_train_set_97 | All unique taxonomic assignments from the GreenGenes v13.8... |
| idtax2df | Converts outputs of DECIPHER's idtaxa algorithm into a... |
| idtax.pr2.sample | Example output of DECIPHER idtaxa function with pr2 taxonomy |
| idtax.silva.sample | Example output of DECIPHER idtaxa function with silva... |
| pr2v4.12.0 | All unique taxonomic assignments from the pr2 reference... |
| rdp_train_set_16 | All unique taxonomic assignments from the RDP Train Set 16 |
| rubric.sample | Example rubric with ASV-identifying data |
| silva.nr.v138 | All unique taxonomic assignments from the Silva SSU nr... |
| sort_my_taxtab | Sorts taxonomy table by ASV-identifying columns. |
| synonyms_v2 | Taxonomic synonyms searched by the taxmapper algorithm |
| taxmapper | Maps an input taxonomy table onto a different taxonomic... |
