API for epichains
Simulating and Analysing Transmission Chain Statistics Using Branching Process Models
| Global functions | |
|---|---|
| .adjust_next_gen | Man page Source code |
| .check_generation_time_valid | Man page Source code |
| .check_offspring_func_valid | Man page Source code |
| .check_sim_args | Man page Source code |
| .check_statistic_args | Man page Source code |
| .check_time_args | Man page Source code |
| .complementary_logprob | Man page Source code |
| .epichains | Man page Source code |
| .epichains_summary | Man page Source code |
| .gborel_size_ll | Man page Source code |
| .geom_length_ll | Man page Source code |
| .get_statistic_func | Man page Source code |
| .get_susceptible_offspring | Man page Source code |
| .init_susc_pop | Man page Source code |
| .is_epichains | Man page Source code |
| .is_epichains_summary | Man page Source code |
| .nbinom_size_ll | Man page Source code |
| .new_epichains | Man page Source code |
| .new_epichains_summary | Man page Source code |
| .offspring_ll | Man page Source code |
| .pois_length_ll | Man page Source code |
| .pois_size_ll | Man page Source code |
| .rbinom_size | Man page Source code |
| .rgen_length | Man page Source code |
| .sample_possible_offspring | Man page Source code |
| .update_chain_stat | Man page Source code |
| .validate_epichains | Man page Source code |
| .validate_epichains_summary | Man page Source code |
| aggregate.epichains | Man page Source code |
| covid19_sa | Man page |
| dborel | Man page Source code |
| epichains | Man page |
| epichains-package | Man page |
| format.epichains | Source code |
| format.epichains_summary | Source code |
| head.epichains | Man page Source code |
| likelihood | Man page Source code |
| print.epichains | Man page Source code |
| print.epichains_summary | Man page Source code |
| rborel | Man page Source code |
| rgborel | Man page Source code |
| simulate_chain_stats | Man page Source code |
| simulate_chains | Man page Source code |
| summary.epichains | Man page Source code |
| summary.epichains_summary | Man page Source code |
| tail.epichains | Man page Source code |
