epiomics: Analysis of Omics Data in Observational Studies

A collection of fast and flexible functions for analyzing omics data in observational studies. Multiple different approaches for integrating multiple environmental/genetic factors, omics data, and/or phenotype data are implemented. This includes functions for performing omics wide association studies with one or more variables of interest as the exposure or outcome; a function for performing a meet in the middle analysis for linking exposures, omics, and outcomes (as described by Chadeau-Hyam et al., (2010) <doi:10.3109/1354750X.2010.533285>); and a function for performing a mixtures analysis across all omics features using quantile-based g-Computation (as described by Keil et al., (2019) <doi:10.1289/EHP5838>).

Package details

AuthorJesse Goodrich [aut, cre] (<https://orcid.org/0000-0001-6615-0472>)
MaintainerJesse Goodrich <jagoodri@usc.edu>
LicenseGPL (>= 3)
Version1.2.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("epiomics")

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epiomics documentation built on April 4, 2025, 1:42 a.m.