Files in evolved

Open Software for Teaching Evolutionary Biology at Multiple Scales Through Virtual Inquiries

NEWS.md README.md R/plotPaintedWhales.R R/checkAndFixUltrametric.R R/WFDriftSim.R R/plotRawFossilOccs.R R/estimateSpeciation.R R/OneGenHWSim.R R/data.R R/NatSelSim.R R/calcFossilDivTT.R R/countSeqDiffs.R R/simulateTree.R R/fitCRBD.R R/simulateBirthDeathRich.R R/plotProteinSeq.R R/lttPlot.R R/plot_helper_functions.R R/proteinSeq.R inst/doc/popgen_intro.Rmd inst/doc/popgen_selection.Rmd inst/doc/intro_R.R inst/doc/birthdeath_phylogenies.R inst/doc/population_genetics.Rmd inst/doc/popgen_drift.Rmd inst/doc/popgen_selection.R inst/doc/birthdeath_deeptime.Rmd inst/doc/deeptime_clocks.R inst/doc/phylogenies_and_diversification.R inst/doc/birthdeath_phylogenies.Rmd inst/doc/deeptime_clocks.Rmd inst/doc/rocks_and_clocks.R inst/doc/popgen_drift.R inst/doc/phylogenies_and_diversification.Rmd inst/doc/intro_R.Rmd inst/doc/deeptime_rocks.R inst/doc/popgen_intro.R inst/doc/birthdeath_deeptime.R inst/doc/population_genetics.R inst/doc/deeptime_rocks.Rmd inst/doc/rocks_and_clocks.Rmd tests/testthat.R tests/testthat/test-WFDriftSim.R tests/testthat/test-OneGenHWSim.R vignettes/popgen_intro.Rmd vignettes/popgen_selection.Rmd vignettes/population_genetics.Rmd vignettes/popgen_drift.Rmd vignettes/birthdeath_deeptime.Rmd vignettes/birthdeath_phylogenies.Rmd vignettes/deeptime_clocks.Rmd vignettes/phylogenies_and_diversification.Rmd vignettes/intro_R.Rmd vignettes/deeptime_rocks.Rmd vignettes/rocks_and_clocks.Rmd man/WFDriftSim.Rd man/birds_spp.Rd man/estimateSpeciation.Rd man/dinos_fossil.Rd man/countSeqDiffs.Rd man/timeseries_fossil.Rd man/lttPlot.Rd man/cytOxidase.Rd man/whale_phylo.Rd man/plotPaintedWhales.Rd man/plotNatSel.Rd man/checkAndFixUltrametric.Rd man/NatSelSim.Rd man/ProteinSeq.Rd man/plotWFDrift.Rd man/fitCRBD.Rd man/plotProteinSeq.Rd man/calcFossilDivTT.Rd man/OneGenHWSim.Rd man/simulateBirthDeathRich.Rd man/plotRawFossilOccs.Rd man/simulateTree.Rd man/data_whales.Rd